Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H14
         (1180 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF135593-1|AAG43279.1|  779|Homo sapiens hVps41p protein.              36   0.38 
AC005247-2|AAS00373.1|   75|Homo sapiens unknown protein.              36   0.38 
U87309-1|AAB47563.1|  854|Homo sapiens hVps41p protein.                33   2.0  
BC044851-1|AAH44851.1|  854|Homo sapiens vacuolar protein sortin...    33   2.0  
AC005247-1|AAS00372.1|  150|Homo sapiens unknown protein.              33   2.0  

>AF135593-1|AAG43279.1|  779|Homo sapiens hVps41p protein.
          Length = 779

 Score = 35.5 bits (78), Expect = 0.38
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -1

Query: 271 FVIVKYYLIYSGKSFFDYFDVVIILIDVYPFAVLVSCRQ 155
           F +V+ + +YSG+ F + FD  I +I V+P  V  SC+Q
Sbjct: 30  FDVVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQ 68


>AC005247-2|AAS00373.1|   75|Homo sapiens unknown protein.
          Length = 75

 Score = 35.5 bits (78), Expect = 0.38
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -1

Query: 271 FVIVKYYLIYSGKSFFDYFDVVIILIDVYPFAVLVSCRQ 155
           F +V+ + +YSG+ F + FD  I +I V+P  V  SC+Q
Sbjct: 30  FDVVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQ 68


>U87309-1|AAB47563.1|  854|Homo sapiens hVps41p protein.
          Length = 854

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 262 VKYYLIYSGKSFFDYFDVVIILIDVYPFAVLVSCRQ 155
           V+ + +YSG+ F + FD  I +I V+P  V  SC+Q
Sbjct: 108 VQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQ 143


>BC044851-1|AAH44851.1|  854|Homo sapiens vacuolar protein sorting
           41 homolog (S. cerevisiae) protein.
          Length = 854

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 262 VKYYLIYSGKSFFDYFDVVIILIDVYPFAVLVSCRQ 155
           V+ + +YSG+ F + FD  I +I V+P  V  SC+Q
Sbjct: 108 VQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQ 143


>AC005247-1|AAS00372.1|  150|Homo sapiens unknown protein.
          Length = 150

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 262 VKYYLIYSGKSFFDYFDVVIILIDVYPFAVLVSCRQ 155
           V+ + +YSG+ F + FD  I +I V+P  V  SC+Q
Sbjct: 108 VQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQ 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,944,464
Number of Sequences: 237096
Number of extensions: 2278189
Number of successful extensions: 12553
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12553
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16513869000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)