Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H13
         (1241 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0655 + 23176075-23176470,23176573-23176710,23177506-231775...    33   0.62 
07_03_0908 + 22507565-22507810,22507925-22508872,22509314-225103...    29   5.7  

>06_03_0655 +
           23176075-23176470,23176573-23176710,23177506-23177574,
           23177652-23177723,23177973-23178055,23178135-23178266,
           23178407-23178617,23179233-23179262
          Length = 376

 Score = 32.7 bits (71), Expect = 0.62
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
 Frame = +1

Query: 463 IQPKTENEELSSEPPFKKTEQKSKPLKTSNGISNMT------NGHSLXXXXXXXXXXXXX 624
           I  +T N E+ S PPF   E K   L  S+G +N+T      N  S              
Sbjct: 217 ILKRTANYEIRSYPPFLIVEAKGDKLTGSSGFNNVTGYIFGKNASSETIAMTTPVFTQAS 276

Query: 625 SHKLTEYFKEEIKVPKVEPAVS-PSPIEKTVKVEKVSNGNANHKLTEFFPVRRSVRKTSK 801
             KL++    +I +P  +   S P+P  + V + KV  G A  K     P    V +  K
Sbjct: 277 DDKLSD-VSIQIVLPMNKDLDSLPAPNTEAVNLRKVEGGIAAVKKFSGRPKEEIVIQKEK 335

Query: 802 CVMAEKMRDL 831
            + ++ ++D+
Sbjct: 336 ELRSQLLKDV 345


>07_03_0908 +
           22507565-22507810,22507925-22508872,22509314-22510337,
           22510425-22510477
          Length = 756

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +1

Query: 652 EEIKVPKVEPAVSPSPIEKTVKVEKVSNGNANHKLTEFFPVRR---SVRKTSKCVMAEKM 822
           +E K P+ E  +   P   T+++    N N  ++LTEF P      +   T   + A+K+
Sbjct: 162 KEAKCPRPETRIG-CPASMTIRL----NTNGKYRLTEFVPNHNHQLATASTMHMLKAKKI 216

Query: 823 RDLERAVREQRED 861
           R   RA RE   D
Sbjct: 217 RLKARAARENLVD 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,515,312
Number of Sequences: 37544
Number of extensions: 387020
Number of successful extensions: 791
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)