Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H13
         (1241 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050346-1|AAH50346.1|  352|Homo sapiens SETD8 protein protein.        39   0.033
AY102937-1|AAM47033.1|  352|Homo sapiens SET domain-containing p...    39   0.033
AY064546-1|AAL40879.1|  322|Homo sapiens H4-K20-specific histone...    39   0.033
AF287261-1|AAF97812.2|  393|Homo sapiens PR/SET domain-containin...    39   0.033
BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X dom...    33   2.1  
AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens ...    33   2.1  
AK026702-1|BAB15532.1|  522|Homo sapiens protein ( Homo sapiens ...    31   6.6  

>BC050346-1|AAH50346.1|  352|Homo sapiens SETD8 protein protein.
          Length = 352

 Score = 39.1 bits (87), Expect = 0.033
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 697 PIEKTVKVEKVSNGNA--NHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           PI+      K + G    N KLT+F+PVRRS RK+   + +E+ + ++  +   +E+G
Sbjct: 160 PIKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEG 217


>AY102937-1|AAM47033.1|  352|Homo sapiens SET domain-containing
           protein 8 protein.
          Length = 352

 Score = 39.1 bits (87), Expect = 0.033
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 697 PIEKTVKVEKVSNGNA--NHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           PI+      K + G    N KLT+F+PVRRS RK+   + +E+ + ++  +   +E+G
Sbjct: 160 PIKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEG 217


>AY064546-1|AAL40879.1|  322|Homo sapiens H4-K20-specific histone
           methyltransferase SET7 protein.
          Length = 322

 Score = 39.1 bits (87), Expect = 0.033
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 697 PIEKTVKVEKVSNGNA--NHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           PI+      K + G    N KLT+F+PVRRS RK+   + +E+ + ++  +   +E+G
Sbjct: 130 PIKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEG 187


>AF287261-1|AAF97812.2|  393|Homo sapiens PR/SET domain-containing
           protein 07 protein.
          Length = 393

 Score = 39.1 bits (87), Expect = 0.033
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 697 PIEKTVKVEKVSNGNA--NHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           PI+      K + G    N KLT+F+PVRRS RK+   + +E+ + ++  +   +E+G
Sbjct: 201 PIKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEG 258


>BC112936-1|AAI12937.1| 1363|Homo sapiens regulatory factor X domain
           containing 2 protein.
          Length = 1363

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +1

Query: 442 KRRIITAIQPKTENEELSSEPPFKKTEQKSKPLKTSNGISNMTNGH 579
           K+++   IQ K + ++L S  P +   +KS+   TSNG++N+ NG+
Sbjct: 207 KQQLQRKIQKKQQEQKLQSPLPGESAAKKSESA-TSNGVTNLPNGN 251


>AK128045-1|BAC87248.1| 1281|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46165 fis, clone TESTI4002868, weakly  similar
           to DNA-binding protein RFX5. ).
          Length = 1281

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +1

Query: 442 KRRIITAIQPKTENEELSSEPPFKKTEQKSKPLKTSNGISNMTNGH 579
           K+++   IQ K + ++L S  P +   +KS+   TSNG++N+ NG+
Sbjct: 207 KQQLQRKIQKKQQEQKLQSPLPGESAAKKSESA-TSNGVTNLPNGN 251


>AK026702-1|BAB15532.1|  522|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23049 fis, clone LNG02559. ).
          Length = 522

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = +1

Query: 628 HKLTEYFKEEIKVPKVEPAVSPSPIEKTVKVEKVSNGNANHKLTEFFPVRRSVRKTSKCV 807
           H L+EY    I +  ++ A SPS   K  K+ + S        T  FP+  SV+++S C+
Sbjct: 318 HSLSEYADNAIVLGVLQGAQSPSSSRKQQKMGQKS----QRPSTANFPLSNSVKESSSCL 373

Query: 808 MAEKMRDLERAVR 846
            +   R    A +
Sbjct: 374 SSSHPRSRSAAAQ 386


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,211,425
Number of Sequences: 237096
Number of extensions: 2170963
Number of successful extensions: 8944
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8943
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17669839830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)