Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H13
         (1241 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY283060-1|AAP35083.1|  691|Drosophila melanogaster histone H4 l...    55   2e-07
AY102673-1|AAM27502.1|  691|Drosophila melanogaster LD12042p pro...    55   2e-07
AE014297-1840|AAN13606.1|  691|Drosophila melanogaster CG3307-PC...    55   2e-07
AE014297-1839|AAN13605.1|  691|Drosophila melanogaster CG3307-PB...    55   2e-07
AE014297-1838|AAF55047.2|  691|Drosophila melanogaster CG3307-PA...    55   2e-07
AY052069-1|AAK93493.1|  502|Drosophila melanogaster SD02279p pro...    31   4.3  
AF125986-1|AAD22080.1|  704|Drosophila melanogaster putative tra...    31   4.3  
AE014298-1028|AAF46251.3|  704|Drosophila melanogaster CG9653-PA...    31   4.3  
AB023583-1|BAA76710.1|  704|Drosophila melanogaster Brk protein.       31   4.3  
AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic ac...    29   10.0 

>AY283060-1|AAP35083.1|  691|Drosophila melanogaster histone H4
           lysine 20-specificmethyltransferase protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +1

Query: 739 NANHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           N N ++T+FFPVRRSVRKT   V  E MR LE+AV E+R DG
Sbjct: 515 NGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDG 556


>AY102673-1|AAM27502.1|  691|Drosophila melanogaster LD12042p
           protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +1

Query: 739 NANHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           N N ++T+FFPVRRSVRKT   V  E MR LE+AV E+R DG
Sbjct: 515 NGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDG 556


>AE014297-1840|AAN13606.1|  691|Drosophila melanogaster CG3307-PC,
           isoform C protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +1

Query: 739 NANHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           N N ++T+FFPVRRSVRKT   V  E MR LE+AV E+R DG
Sbjct: 515 NGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDG 556


>AE014297-1839|AAN13605.1|  691|Drosophila melanogaster CG3307-PB,
           isoform B protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +1

Query: 739 NANHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           N N ++T+FFPVRRSVRKT   V  E MR LE+AV E+R DG
Sbjct: 515 NGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDG 556


>AE014297-1838|AAF55047.2|  691|Drosophila melanogaster CG3307-PA,
           isoform A protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +1

Query: 739 NANHKLTEFFPVRRSVRKTSKCVMAEKMRDLERAVREQREDG 864
           N N ++T+FFPVRRSVRKT   V  E MR LE+AV E+R DG
Sbjct: 515 NGNREMTDFFPVRRSVRKTKTAVKEEWMRGLEQAVLEERCDG 556


>AY052069-1|AAK93493.1|  502|Drosophila melanogaster SD02279p
           protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +1

Query: 325 SRVEMVRVNTLMAVQXGVKXPHRIELCEXKPARPTRNYRKRRIITA-IQPK--TENEELS 495
           +R+E V     M +  G     +++L E  P+     +RKR++IT+ +QP   ++ EE+ 
Sbjct: 165 NRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGVDLTFRKRKVITSPMQPDKISKLEEVI 224

Query: 496 SEPPFKKTEQK 528
            + P  +TE +
Sbjct: 225 KKEPETETENE 235


>AF125986-1|AAD22080.1|  704|Drosophila melanogaster putative
           transcription factor protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +1

Query: 325 SRVEMVRVNTLMAVQXGVKXPHRIELCEXKPARPTRNYRKRRIITA-IQPK--TENEELS 495
           +R+E V     M +  G     +++L E  P+     +RKR++IT+ +QP   ++ EE+ 
Sbjct: 367 NRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGVDLTFRKRKVITSPMQPDKISKLEEVI 426

Query: 496 SEPPFKKTEQK 528
            + P  +TE +
Sbjct: 427 KKEPETETENE 437


>AE014298-1028|AAF46251.3|  704|Drosophila melanogaster CG9653-PA
           protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +1

Query: 325 SRVEMVRVNTLMAVQXGVKXPHRIELCEXKPARPTRNYRKRRIITA-IQPK--TENEELS 495
           +R+E V     M +  G     +++L E  P+     +RKR++IT+ +QP   ++ EE+ 
Sbjct: 367 NRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGVDLTFRKRKVITSPMQPDKISKLEEVI 426

Query: 496 SEPPFKKTEQK 528
            + P  +TE +
Sbjct: 427 KKEPETETENE 437


>AB023583-1|BAA76710.1|  704|Drosophila melanogaster Brk protein.
          Length = 704

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
 Frame = +1

Query: 325 SRVEMVRVNTLMAVQXGVKXPHRIELCEXKPARPTRNYRKRRIITA-IQPK--TENEELS 495
           +R+E V     M +  G     +++L E  P+     +RKR++IT+ +QP   ++ EE+ 
Sbjct: 367 NRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGVDLTFRKRKVITSPMQPDKISKLEEVI 426

Query: 496 SEPPFKKTEQK 528
            + P  +TE +
Sbjct: 427 KKEPETETENE 437


>AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha5 subunit protein.
          Length = 807

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 385 PHRIELCEXKPARPTRNYRKRRIITAIQPKTENEELSSEPPF---KKTEQKSKPLKTSN 552
           P  I LC  K  R  R  RKR+  T  +   + ++  S PPF   K T+  S P  T++
Sbjct: 125 PTNIRLCARKRQR-LRRRRKRKPATPNETDIKKQQQLSMPPFKTRKSTDTYSTPAATTS 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,267,053
Number of Sequences: 53049
Number of extensions: 680752
Number of successful extensions: 1919
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6641632230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)