Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H10
         (1251 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   1.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect(2) = 1.4
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = -3

Query: 529 GRGFXXGGXGGGPXXXXPXPXGGGXFXXXXKXPPPPP 419
           G G+      GGP    P P  GG          PPP
Sbjct: 515 GAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 21.0 bits (42), Expect(2) = 1.4
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 433 PPPPPP 416
           PPPPPP
Sbjct: 585 PPPPPP 590


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -3

Query: 955 GXXGGXGXPPXLGGGGPXPXGXPPXGGXXXAPPXPRGXRG 836
           G  G  G P   G  GP   G P  G      P P+G RG
Sbjct: 383 GEPGRDGIPGQPGIAGPA--GAPGGGEGRPGAPGPKGPRG 420


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 852 GXGGAXXXPPXGGXPXGXGPPPPXXGG 932
           G GG+    P GG     GP P   GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 25.0 bits (52), Expect = 4.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 964 PXXGXXGGXGXPPXLGGGGPXPXGXPPXGG 875
           P  G  G  G  P  GGGG    G  P GG
Sbjct: 200 PGAGGGGSGGGAP--GGGGGSSGGPGPGGG 227



 Score = 24.6 bits (51), Expect = 6.1
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -3

Query: 928 PXLGGGGPXPXGXPPXGGXXXAPPXPRGXRG 836
           P  GGGG    G P  GG     P P G  G
Sbjct: 200 PGAGGGGSG-GGAPGGGGGSSGGPGPGGGGG 229



 Score = 24.2 bits (50), Expect = 8.1
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 547 PPXXXGGRGFXXGGXGGGPXXXXPXPXGGG 458
           P    GG G    G GGG     P P GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGG-PGPGGGG 228


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -3

Query: 565 GGXXPXPPXXXGGRGFXXGGXGGGPXXXXPXPXGGG 458
           GG    P     GRG    G GGG         GGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.153    0.529 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,018
Number of Sequences: 2352
Number of extensions: 16350
Number of successful extensions: 63
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143061450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)