Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_H08
(1212 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 25 1.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 25 1.1
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 25 1.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 4.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 4.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 4.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 4.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 4.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 4.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 4.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 4.6
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 8.0
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 25.0 bits (52), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 594 INNNNRTDKNHP*KHYNKNLNI 529
+N RTD+ H +HY N N+
Sbjct: 290 MNQEYRTDRKHTQQHYQMNQNM 311
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 25.0 bits (52), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 594 INNNNRTDKNHP*KHYNKNLNI 529
+N RTD+ H +HY N N+
Sbjct: 238 MNQEYRTDRKHTQQHYQMNQNM 259
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 25.0 bits (52), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 594 INNNNRTDKNHP*KHYNKNLNI 529
+N RTD+ H +HY N N+
Sbjct: 421 MNQEYRTDRKHTQQHYQMNQNM 442
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 129 TSSTSSTEKAGTNNNN 144
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 627 TNKTSSTHKIIINNNN 580
T+ TSST K NNNN
Sbjct: 173 TSSTSSTEKAGTNNNN 188
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 22.2 bits (45), Expect = 8.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 489 YYNINIMFVLSVF*CLDFYCNV 554
Y N I+F LSVF L +Y ++
Sbjct: 321 YCNFIILFYLSVFVILVYYASL 342
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,774
Number of Sequences: 336
Number of extensions: 2561
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35349784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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