Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H04
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.90 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   2.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   6.4  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 0.90
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
 Frame = -2

Query: 909 GEPPPXGXXG----KXPPXPXGXXGGPGFXXXPGXD 814
           G P P G  G    K  P P G  G PG    PG D
Sbjct: 146 GTPGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVD 181



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 18/50 (36%), Positives = 19/50 (38%)
 Frame = +2

Query: 527 PGPXXXGGGXGXPPPXGGXXGXPQXXGXPRXKXXGXGAPXGPXPEKGXGG 676
           PG     G  G PP   G  G P   G P  K  G   P GP   +G  G
Sbjct: 552 PGRPGKTGRDG-PPGLTGEKGEP---GLPVWKDRGPSGPSGPLGPQGEKG 597



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -2

Query: 909 GEPPPXGXXGKXPPXPXGXXGGPGFXXXPG 820
           GE P      K PP P G  G  G    PG
Sbjct: 705 GETPQLPPQRKGPPGPPGFNGPKGDKGLPG 734


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 22/76 (28%), Positives = 24/76 (31%)
 Frame = -1

Query: 775 PXXFKTPXGXXPPXXGXXFXXGXPGGGXXGXXPPXXPLFGXGPXXGPXAXXFXPGXPPXL 596
           P   + P    PP  G       P  G     PP  P+    P   P A    PG  P  
Sbjct: 189 PQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPM-PMRPQMPPGA---VPGMQP-- 242

Query: 595 GXTRXPPXGGGXPXPP 548
           G    PP   G   PP
Sbjct: 243 GMQPRPPSAQGMQRPP 258



 Score = 26.6 bits (56), Expect = 1.6
 Identities = 23/89 (25%), Positives = 23/89 (25%)
 Frame = -1

Query: 1162 PGXGXPPXXXXXXGXPXKNPXXXXXPXXPXXXPXGGKKXXFXPXGGXXPXNXPRKXAPXX 983
            P  G PP            P     P  P     GG      P G   P           
Sbjct: 181  PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQ--PPGVPMPMRPQMPPGAVP 238

Query: 982  GXXXGGGXXPPPPXXGGGXPPPXXGGTPP 896
            G   G    P PP   G   PP  G  PP
Sbjct: 239  GMQPG--MQPRPPSAQGMQRPPMMGQPPP 265



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
 Frame = -1

Query: 1036 PXGGXXPXNXPRKXAPXXGXXXG--GGXXPPPPXXGGGXPPPXXGGTP 899
            P GG  P   P+      G   G  G   PP P  GG    P  G  P
Sbjct: 271  PMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRP 318



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 23/93 (24%), Positives = 24/93 (25%), Gaps = 4/93 (4%)
 Frame = -2

Query: 900 PPXGXXGKXPPXPXGXXGG--PGFXXXPGXDXXXXXXXXXXGXXPGXLKPRXGXPPPXXG 727
           PP       P  P G   G  PG    P                P       G P P   
Sbjct: 221 PPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQIS 280

Query: 726 XDFXXVXRG--GGXXGKXPPPXPFSGXGPXGAP 634
                +  G   G  G   PP P  G  P G P
Sbjct: 281 PQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPP 313


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 955 PPPPXXGGGXPPPXXGGTPPXGG 887
           PPPP   G  P P  GG  P GG
Sbjct: 585 PPPPPPMGPPPSPLAGG--PLGG 605


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 21/75 (28%), Positives = 21/75 (28%)
 Frame = +2

Query: 551 GXGXPPPXGGXXGXPQXXGXPRXKXXGXGAPXGPXPEKGXGGGXXPXXPPPRXTXXKSXP 730
           G    P   G  G P   G       G G P  P P KG  G   P  P           
Sbjct: 380 GPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGP-KGPRGYEGPQGPKGMDGFDGEKG 438

Query: 731 XXGGGXPXRGFKXPG 775
             G   P  G   PG
Sbjct: 439 ERGQMGPKGGQGVPG 453


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = +3

Query: 897 GGVPPXXGG--GXPPPXXGGGG 956
           GG P   GG  G P P  GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.4 bits (53), Expect = 3.6
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +2

Query: 629 GXGAPXGPXPEKGXGGGXXPXXPPPRXTXXKSXPXXGGG 745
           G G+  GP P  G GGG        R    +     GGG
Sbjct: 215 GGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 527 PGPXXXGGGXGXPPPXGGXXGXPQXXG 607
           PG    G G G P   GG  G P   G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGG 226


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 678 PPPXPFSGXGPXGAPXPXXFXRGXP 604
           PPP P S   P G P P    +  P
Sbjct: 786 PPPPPPSSLSPGGVPRPTVLQKLDP 810


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = +1

Query: 565 PPPGGGXGXPPXXGXXPXKXXXPRGPXXARXRKGXXXGGFXXGPPPPXXPXKIXPPXGGG 744
           PPP      PP  G  P     P  P                 PPP   P    PP G G
Sbjct: 79  PPPT--MNMPPRPGMIPGMPGAP--PLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLG 134

Query: 745 XXPP 756
             PP
Sbjct: 135 MRPP 138



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 888  PPXGGVPPXXGGGXPPPXXGGGGXXPPPXXXPXXGAXXRGKFXGXXPP 1031
            P   G PP   G   P      G  PPP   P  G    G   G  PP
Sbjct: 93   PGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMG--LGMRPP 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 916,018
Number of Sequences: 2352
Number of extensions: 19513
Number of successful extensions: 72
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)