Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H01
         (1192 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41046 Cluster: Centrosomal and chromosomal factor; n=1...    97   1e-18
UniRef50_UPI0000DB709E Cluster: PREDICTED: similar to corto CG25...    83   1e-14
UniRef50_Q46TT5 Cluster: Molybdopterin binding domain; n=2; Cupr...    35   4.8  
UniRef50_Q6ZU42 Cluster: CDNA FLJ44010 fis, clone TESTI4024344; ...    34   6.3  

>UniRef50_P41046 Cluster: Centrosomal and chromosomal factor; n=1;
           Drosophila melanogaster|Rep: Centrosomal and chromosomal
           factor - Drosophila melanogaster (Fruit fly)
          Length = 550

 Score = 96.7 bits (230), Expect = 1e-18
 Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +1

Query: 184 QRTASDGTHV-PLH*PPGXYSVPLHVDCSIEYELPDCAKPPQGVKIEPLLMIHPSHFRRL 360
           Q+TAS  ++  P   P   YS+PLHVDCS+EYELP+  KPP G ++EPLLMIHP +FR++
Sbjct: 125 QQTASSNSNAAPAPSPQKDYSIPLHVDCSVEYELPNQPKPPAGQRVEPLLMIHPCYFRKM 184

Query: 361 ESLRRVPFVNNL 396
           ES RR PFVNN+
Sbjct: 185 ESQRRSPFVNNM 196


>UniRef50_UPI0000DB709E Cluster: PREDICTED: similar to corto
           CG2530-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
           to corto CG2530-PA - Apis mellifera
          Length = 625

 Score = 83.4 bits (197), Expect = 1e-14
 Identities = 39/54 (72%), Positives = 42/54 (77%)
 Frame = +1

Query: 238 YSVPLHVDCSIEYELPDCAKPPQGVKIEPLLMIHPSHFRRLESLRRVPFVNNLP 399
           YS PLHVDCS+EYELP  AKPP G   EPLLMIHP ++RR E  RR PFVNNLP
Sbjct: 119 YSQPLHVDCSVEYELPSQAKPPPGGG-EPLLMIHPCYYRRAERERRSPFVNNLP 171


>UniRef50_Q46TT5 Cluster: Molybdopterin binding domain; n=2;
           Cupriavidus necator|Rep: Molybdopterin binding domain -
           Ralstonia eutropha (strain JMP134) (Alcaligenes
           eutrophus)
          Length = 406

 Score = 34.7 bits (76), Expect = 4.8
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 444 AIRRSDGGRGCCISSRQVIYKGDAPQALEP-PEVR 343
           A+R  D   G C+  +QV+Y G  PQAL P P +R
Sbjct: 56  AVRCEDWQGGACLPVQQVVYAGTRPQALRPAPAIR 90


>UniRef50_Q6ZU42 Cluster: CDNA FLJ44010 fis, clone TESTI4024344;
           n=1; Homo sapiens|Rep: CDNA FLJ44010 fis, clone
           TESTI4024344 - Homo sapiens (Human)
          Length = 181

 Score = 34.3 bits (75), Expect = 6.3
 Identities = 26/72 (36%), Positives = 29/72 (40%)
 Frame = -3

Query: 779 ARLRAGYM*IGSCCNARLSKRS*GTAGGCSARAISQSRASGGRYGCGFSRALVASLPPPA 600
           ARLRAG   +G  C A       G   G  ARA +   A+  R G  FS       PP A
Sbjct: 16  ARLRAG---VGGACVAGAKSHGAGLGAGRRARAETHVTAARRRDGWNFSNPKSRDRPPLA 72

Query: 599 VSGAYDSKR*HG 564
            S A      HG
Sbjct: 73  CSRALQDPLAHG 84


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,037,661
Number of Sequences: 1657284
Number of extensions: 13678075
Number of successful extensions: 35530
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35517
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119538648642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)