Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_H01
         (1192 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    32   0.92 
Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical pr...    30   3.7  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U53335-4|AAL27231.1|  504|Caenorhabditis elegans Hypothetical pr...    29   8.5  

>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 31.9 bits (69), Expect = 0.92
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 191  PLPTGRTSRFTSPQGITRCLYT*TAVSNTSFPTVP 295
            P+P  R+S+ TSP   +R + T T VS TS P  P
Sbjct: 1615 PVPPWRSSKSTSPAIASRLINTTTTVSGTSSPPPP 1649


>Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical
           protein F53C11.1 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 175 SSPQRTASDGTHVPLH*PPGXYSVPLHVDCSIEYELPD 288
           +SP  +     H PL+   G    P + DCS+E+E+PD
Sbjct: 24  NSPITSNVPSGHFPLN---GLAKFPANYDCSVEFEIPD 58


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 707 TAGGCSARAISQSRASGGRYGCGFSRALVASLPPPAVSGAY 585
           +AGG S  + S   AS G Y  G S    A    PA SG Y
Sbjct: 428 SAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAPASSGGY 468


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -3

Query: 707 TAGGCSARAISQSRASGGRYGCGFSRALVASLPPPAVSGAY 585
           +AGG S  + S   AS G Y  G S    A    PA SG Y
Sbjct: 428 SAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAPASSGGY 468


>U53335-4|AAL27231.1|  504|Caenorhabditis elegans Hypothetical
           protein C55C3.3 protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/60 (26%), Positives = 22/60 (36%)
 Frame = +1

Query: 571 YRFESYAPETAGGGKLATRARLKPHPYLPPEALDCDIARALQPPAVPYDRFDKRALQQLP 750
           YR         GG ++  +   KP   + P   D  + +   PP  P    D   LQ LP
Sbjct: 21  YRLYIVKTRRRGGNQIKKKKPAKPLKRITPNNSDEKLKKMKSPPKKPLQATDSDILQPLP 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,194
Number of Sequences: 27780
Number of extensions: 314932
Number of successful extensions: 639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3265985354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)