Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G23
         (1133 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2HE18 Cluster: Putative uncharacterized protein; n=2; ...    38   0.36 
UniRef50_Q2BBJ9 Cluster: Putative uncharacterized protein; n=1; ...    35   4.5  

>UniRef50_Q2HE18 Cluster: Putative uncharacterized protein; n=2;
            Sordariales|Rep: Putative uncharacterized protein -
            Chaetomium globosum (Soil fungus)
          Length = 995

 Score = 38.3 bits (85), Expect = 0.36
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +3

Query: 909  IYTXILLDQDGYGNALKSTSTWFKKVADMPGSLVHHATRGXRLTWKPTEPDARNXVRFW 1085
            +YT  L+  DG+G+ L +TS   +   D P  +   A+R  RL +  T+P A N   +W
Sbjct: 855  VYTTPLIGHDGHGHTLMATSLALR---DAPEHIFKAASRSDRLLFPSTKPIATNFEAYW 910


>UniRef50_Q2BBJ9 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
           protein - Bacillus sp. NRRL B-14911
          Length = 192

 Score = 34.7 bits (76), Expect = 4.5
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 312 DPDNKTFLPIGSKEIGTVYPKNIFTKVVKINKINSPREQLAEFRKDHYFDRFRGD 476
           D   K  L  GS+ I + YP   F KV  I +  +  + L+ F++DH+ DR+ G+
Sbjct: 17  DSIEKGHLNSGSELIKSYYP---FQKVEYIKRTYTKADMLSIFQRDHFIDRYSGE 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 916,143,692
Number of Sequences: 1657284
Number of extensions: 16564141
Number of successful extensions: 39996
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39984
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 111813361825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)