Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G22
         (1193 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81098-8|CAB03184.2|  280|Caenorhabditis elegans Hypothetical pr...    99   7e-21
Z81080-6|CAB03089.2|  280|Caenorhabditis elegans Hypothetical pr...    99   7e-21
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    35   0.099

>Z81098-8|CAB03184.2|  280|Caenorhabditis elegans Hypothetical
           protein F39H2.3 protein.
          Length = 280

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 72/231 (31%), Positives = 109/231 (47%)
 Frame = +2

Query: 167 VATPLLSPFASRKXXNLAGXAAGVSLQGLXXHAMRHFXAGASSIYAXFLNTKGRVLYXVL 346
           ++T  L     R    L G      LQGL  + +       + + A  LNTKGR++  VL
Sbjct: 1   MSTQRLIKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQT-QNGLAAFLLNTKGRIVEDVL 59

Query: 347 XHKWNXDXSFLLACXKNVISHIQKHLKMYKLKXLVEITDLSNEYKIHALVPNVNIGVVTP 526
             +   D  F L C K   + + K +  Y+L+  VEIT+ S++           I     
Sbjct: 60  LWRRGTDDLF-LECSKENKTILTKEILKYRLRKQVEITESSDQ-----------IFFTED 107

Query: 527 THNVNIYKDPRLPELGMRIISPMSITHSELIKIPTKDIQIKNSEEGYKCLRYKLGVSEGS 706
             +   ++DPR    G R+    S +            ++  + E Y+ LR   G++EGS
Sbjct: 108 VSDKQAHRDPRFSGFGARVFGNPSSS------------EVSENREKYENLRRSAGIAEGS 155

Query: 707 EDLPPGVTFPLEVNCDYLHGVSFHKGCYIGQELTARVHHTGVVRKRIMPIK 859
           ++L      P + N D L+ VS  KGCY+GQELTAR  HTGV+R+RI+P +
Sbjct: 156 QEL--AELLPFQANGDLLNMVSLDKGCYVGQELTARTAHTGVIRRRILPFE 204


>Z81080-6|CAB03089.2|  280|Caenorhabditis elegans Hypothetical
           protein F39H2.3 protein.
          Length = 280

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 72/231 (31%), Positives = 109/231 (47%)
 Frame = +2

Query: 167 VATPLLSPFASRKXXNLAGXAAGVSLQGLXXHAMRHFXAGASSIYAXFLNTKGRVLYXVL 346
           ++T  L     R    L G      LQGL  + +       + + A  LNTKGR++  VL
Sbjct: 1   MSTQRLIKLPHRVLLKLHGSDTNAFLQGLITNDVTKLQT-QNGLAAFLLNTKGRIVEDVL 59

Query: 347 XHKWNXDXSFLLACXKNVISHIQKHLKMYKLKXLVEITDLSNEYKIHALVPNVNIGVVTP 526
             +   D  F L C K   + + K +  Y+L+  VEIT+ S++           I     
Sbjct: 60  LWRRGTDDLF-LECSKENKTILTKEILKYRLRKQVEITESSDQ-----------IFFTED 107

Query: 527 THNVNIYKDPRLPELGMRIISPMSITHSELIKIPTKDIQIKNSEEGYKCLRYKLGVSEGS 706
             +   ++DPR    G R+    S +            ++  + E Y+ LR   G++EGS
Sbjct: 108 VSDKQAHRDPRFSGFGARVFGNPSSS------------EVSENREKYENLRRSAGIAEGS 155

Query: 707 EDLPPGVTFPLEVNCDYLHGVSFHKGCYIGQELTARVHHTGVVRKRIMPIK 859
           ++L      P + N D L+ VS  KGCY+GQELTAR  HTGV+R+RI+P +
Sbjct: 156 QEL--AELLPFQANGDLLNMVSLDKGCYVGQELTARTAHTGVIRRRILPFE 204


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 35.1 bits (77), Expect = 0.099
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -1

Query: 845  FFSLQLLYDELVLSVLVQYNNPCGS*HHEDSHSSLPKERLLQAVN 711
            FFS +  Y++++   +  YN  CG   HE +  S+  ER+L  VN
Sbjct: 943  FFSNKCSYNQILRKAIQMYNRLCGFDSHETTFKSVRHERMLCGVN 987


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,319,042
Number of Sequences: 27780
Number of extensions: 392035
Number of successful extensions: 784
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)