Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G22
         (1193 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    27   0.33 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    27   0.33 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.99 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   3.0  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   9.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   9.3  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 27.1 bits (57), Expect = 0.33
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 633 FVGIFINSECVIDIGDIILIPSSGNLGSLYILTLCVGVT 517
           F+G  + + C+I +  + +   +GN     I TLCV ++
Sbjct: 707 FIGFTMYTTCIIWLAFVPIYFGTGNAHETQITTLCVAIS 745


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 27.1 bits (57), Expect = 0.33
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 633 FVGIFINSECVIDIGDIILIPSSGNLGSLYILTLCVGVT 517
           F+G  + + C+I +  + +   +GN     I TLCV ++
Sbjct: 797 FIGFTMYTTCIIWLAFVPIYFGTGNAHETQITTLCVAIS 835


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 401 ISHIQKHLKMYKLKXLVEITDLSNEYKIHALVPNVNIGVVTPT 529
           +SH Q+ +     + +VE TD+S E   H  +     GV TPT
Sbjct: 694 VSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPT 736


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 20/83 (24%), Positives = 33/83 (39%)
 Frame = +2

Query: 500  NVNIGVVTPTHNVNIYKDPRLPELGMRIISPMSITHSELIKIPTKDIQIKNSEEGYKCLR 679
            + NIG    +  V +    R+P          + T+ E +K+P   + +   E  +K   
Sbjct: 1255 STNIGEGEASKIVALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRG 1314

Query: 680  YKLGVSEGSEDLPPGVTFPLEVN 748
              L  S+    LP G  F  EV+
Sbjct: 1315 AVLQSSDRLRQLPEGSLFIKEVD 1337


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 553 VFIYINIVCWSNYTNIHIWY 494
           + I +  +CW+ Y  + +WY
Sbjct: 264 IIIAVFFICWTPYYVMSLWY 283


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 874 HCLCKLNWHYSFPYNS 827
           H LC  + H+  P+NS
Sbjct: 294 HILCMSDLHWQLPHNS 309


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 752 DYLHGVSFHKGCYIGQELTARVHHTGVVRKRIM 850
           D+L  +S   G  +GQ     VH    + KR++
Sbjct: 225 DHLRIISMQMGGDLGQVYRRLVHAVNEIEKRLL 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,162
Number of Sequences: 438
Number of extensions: 4932
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40729338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)