Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G19
(1167 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 50 8e-07
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 43 9e-05
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 42 1e-04
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 42 2e-04
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 42 2e-04
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 38 0.002
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 32 0.18
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 31 0.41
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 31 0.41
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 3.8
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 27 6.6
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 6.6
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 49.6 bits (113), Expect = 8e-07
Identities = 26/84 (30%), Positives = 52/84 (61%)
Frame = +3
Query: 477 LFQQDEDGDTQLHIASVHGCEKSVGTLIRVCPEKSWLDVPNDYGHTPLHLAVMSGNAIIT 656
L ++DE+G++ LH+AS +G V +I K ++ N+ G+T +H A ++G+A I
Sbjct: 29 LSRRDENGNSGLHMASANGHIAVVQKIIPYL-NKEVINAQNESGNTAMHWAALNGHAEIC 87
Query: 657 RMLVIAGADIGARDCLGETPLHKA 728
++L+ AG D ++ ++P+++A
Sbjct: 88 KLLLEAGGDPHIKNIYEKSPIYEA 111
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 42.7 bits (96), Expect = 9e-05
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +3
Query: 474 LLFQQDEDGDTQLHIASVHGCEKSVGTLIRVCPEKSWLDVPNDYGHTPLHLAVMSGNAII 653
L+ ++D G T LH A+ G + V LI +++ L+ + YG TPLH A+ G+ +
Sbjct: 133 LIRKKDLQGQTPLHRAAAVGKIQVVKYLIS---QRAPLNTSDSYGFTPLHFALAEGHPDV 189
Query: 654 TRMLVIAGADIGARDCLGETPL 719
LV AGAD +D T L
Sbjct: 190 GVELVRAGADTLRKDSENHTAL 211
Score = 39.9 bits (89), Expect = 7e-04
Identities = 28/82 (34%), Positives = 35/82 (42%)
Frame = +3
Query: 498 GDTQLHIASVHGCEKSVGTLIRVCPEKSWLDVPNDYGHTPLHLAVMSGNAIITRMLVIAG 677
G T LH A+ G V L PE + + G TPLH A G + + L+
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLCDKAPEL--IRKKDLQGQTPLHRAAAVGKIQVVKYLISQR 164
Query: 678 ADIGARDCLGETPLHKATAXRH 743
A + D G TPLH A A H
Sbjct: 165 APLNTSDSYGFTPLHFALAEGH 186
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 606 GHTPLHLAVMSGNAIITRMLVIAGAD-IGARDCLGETPLHKATAXRHIXCLXALLAK 773
G T LH A G I ++L + I +D G+TPLH+A A I + L+++
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQ 163
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/94 (31%), Positives = 47/94 (50%)
Frame = +3
Query: 486 QDEDGDTQLHIASVHGCEKSVGTLIRVCPEKSWLDVPNDYGHTPLHLAVMSGNAIITRML 665
+D+ G LH+A VH + ++ + +D+ +D HTPL A GN IT L
Sbjct: 97 KDKQGFNCLHLA-VHAASPLL--VVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCL 153
Query: 666 VIAGADIGARDCLGETPLHKATAXRHIXCLXALL 767
+ GAD+ A D TPLH + ++ C+ +L
Sbjct: 154 LRWGADVLATDEDKMTPLHWSIVGGNLKCMKLIL 187
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 597 NDYGHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPL 719
++ G+TP+H AV G++ + ++LV G DI RD GETPL
Sbjct: 34 DENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +3
Query: 570 PEKSWLDVPNDYGHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPLHKATAXRH 743
P S + N+ G + LHL G + + L AG D+ RD LG TPLH A+ H
Sbjct: 850 PYLSDFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDH 907
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 591 VPNDYGHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPLHKA 728
V +D GHT LH A G+ + ++L+ A ADIG + L +TPL ++
Sbjct: 243 VIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMRS 288
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 31.9 bits (69), Expect = 0.18
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 573 EKSWLDVPNDYGHTPLHLAVMSG-NAIITRMLVIAGADIGARD-CLGETPLHKATAXRHI 746
+K ++ + YG T LH+AV N+ + +L G D+ +D G T LH+A ++
Sbjct: 41 QKLRINQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNL 100
Query: 747 XCLXALLAK 773
LL+K
Sbjct: 101 EAASLLLSK 109
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 612 TPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPLHKATAXRHI 746
TPLH AV NA + L+ GAD + G+TP +T + +
Sbjct: 435 TPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKEV 479
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 606 GHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPL 719
GHT LH A GN + L+ AGA++ A + L +T L
Sbjct: 237 GHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSL 274
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 486 QDEDGDTQLHIASVHGCEKSVGTLIRVCPEKSWLDVPNDYGHTP 617
QD+ GDT L I + +G +K L+ S +PN+ G P
Sbjct: 354 QDDHGDTALLICARNGAKKCARLLLSFYASSS---IPNNQGQYP 394
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 606 GHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETP 716
G T LH+A + +A + + L+ GAD RD G+ P
Sbjct: 189 GQTYLHVATKAKDAELVKWLLDNGADPYRRDKFGKLP 225
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 433 RVLHRVPQTFLRCIYCSNRTRTETHNYTSPP 525
R L+ +P+T L Y SN + H SPP
Sbjct: 45 RRLYNLPRTLLNSRYYSNHSHGLVHGSKSPP 75
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.6 bits (56), Expect = 6.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 585 LDVPND-YGHTPLHLAVMSGNAIITRMLVIAGADIGARDCLGETPLHKA 728
LDVP D GH LH A + + L+ GA+ + GET L ++
Sbjct: 349 LDVPIDELGHAALHWAAAVAKMPLLQALIHKGANPLRGNLTGETALMRS 397
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,984,660
Number of Sequences: 5004
Number of extensions: 57868
Number of successful extensions: 188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 625545148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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