Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G16
         (1188 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    26   2.5  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    25   4.3  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         25   4.3  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   5.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   7.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   7.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   7.6  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 871 C*VDQPSYIENIYVAENCADVEGVPNCFSPQCWYICRHDEA 749
           C VD+P++ + +YV  N  +     NC +     ICR D A
Sbjct: 153 CTVDKPNW-KLLYVRFNEFNTSSADNCTTENDEVICREDYA 192


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 449 KSYKARLPLXILLTIFNTIAFQDAVVDWARDHRMHHKY 562
           KS    LP  ILL   N + F  ++V W + + ++  Y
Sbjct: 73  KSAFDSLPHAILLAKLNKVRFPCSLVQWLKSYLINRTY 110


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 252 LPQQRSAHGSLCGATCFCSXFCMSVVF 332
           +P     H S+CGA C C+      VF
Sbjct: 13  IPLTTDQHSSVCGALCDCAARVQVEVF 39


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 380 FAIFLYLC---SGLGITAGAHXLWAHKSYKARLPLXILLTIFNT 502
           FA+ L +C    GL +  GA   W ++  + R P  ++ +++NT
Sbjct: 184 FALTLSVCLCVGGLVVLLGAF-FWVYRRREKRKPAYLMNSLYNT 226


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +2

Query: 389 FLYLCSGLGITAGAHXLWAHKSYKAR---LPLXILLTIFNTIAFQDAVVDWARDHRMHHK 559
           F+  C+   I AGA     +   KA    LP  ILL   + +     +V W + + +H  
Sbjct: 666 FVTYCTSQ-IDAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIPSPLVQWLKSYLIHRT 724

Query: 560 Y 562
           Y
Sbjct: 725 Y 725


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 594 VALWGSASVSEYLWCIR 544
           V  W   +  EY+WCIR
Sbjct: 98  VYAWKGETDEEYMWCIR 114


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 263 LLREVHGAVQLXGRALAAVADQTHEAAXXLW 171
           L+  +HG      R LA VAD T   A  +W
Sbjct: 840 LMPNLHGPRTSMSRLLANVADSTMRYAAPVW 870


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,044,711
Number of Sequences: 2352
Number of extensions: 21441
Number of successful extensions: 52
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134477763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)