Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G15
         (1217 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0995 - 29545058-29545204,29545988-29546074,29546166-295463...    95   8e-20
03_02_0099 - 5614007-5614233,5614725-5614998,5615086-5616179,561...    32   0.79 
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449...    29   5.6  
11_04_0001 + 11984639-11984875,11984989-11985278,11985361-119857...    29   7.4  
05_01_0518 + 4421314-4421346,4421427-4421767,4421960-4422619,442...    29   9.8  

>03_05_0995 -
           29545058-29545204,29545988-29546074,29546166-29546361,
           29546686-29546915
          Length = 219

 Score = 95.5 bits (227), Expect = 8e-20
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
 Frame = +3

Query: 237 PDXLIKLDNWYQNELPKKXKSRGKDAHMIHEELVQLMKWKQARGKFYPQLSYLIKVNTPR 416
           PD L+++D++Y+ +LP   + R  +  +   ELV+L++WK +RGK+ P+L   +K     
Sbjct: 32  PD-LVEVDSFYRRDLPDLLRRRDPEPFLAKPELVRLLQWKLSRGKWRPRLMDFVKGLEDA 90

Query: 417 AVMQETKKAFRKLPNIESAMTALSNLKGVGXXXXXXXXXXXXPEIAPFMADECVQAIPEM 596
            V   + KAF  LP++  A+T L+ LKGVG            P++APFM+DE + A    
Sbjct: 91  VVESASCKAFAALPDLRKAITELTVLKGVGPATASAVLAAYAPDVAPFMSDEAMVAALG- 149

Query: 597 EGSDYTAREYLNFVSHIRNVCDRLNEEQNGCGKKWFPHM-VELALWTHNIVSDLQPQLLG 773
              +YT ++YL F   ++     L+      G++ F    VE ALW+  + S       G
Sbjct: 150 NAKEYTLKQYLAFAEKLQTKSKELSS-----GEEVFTTSDVERALWSSAVASKSLKAPPG 204

Query: 774 KEPNNRPAANG 806
            +  N+   +G
Sbjct: 205 NDLENKSKTHG 215


>03_02_0099 -
           5614007-5614233,5614725-5614998,5615086-5616179,
           5616674-5616772,5617371-5617389
          Length = 570

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +3

Query: 750 DLQPQLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNED 896
           +LQ    GK+P  +  +NG SP  S+   LEP   NGN   V D   ED
Sbjct: 522 ELQQAEKGKKPTTKNKSNGKSP-GSNGKQLEP--ANGNSSAVDDEATED 567


>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
            4498179-4499263,4499351-4500296
          Length = 1264

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 810  SPLPSDESNLEPPATNGNGKLVTD 881
            SP PS  S+  PP T G G L +D
Sbjct: 1233 SPSPSSSSSSSPPVTRGRGSLPSD 1256


>11_04_0001 +
           11984639-11984875,11984989-11985278,11985361-11985719,
           11985797-11985984,11986058-11986247,11986497-11986631,
           11986694-11986947
          Length = 550

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 747 SDLQPQLLGKEPNNRPAANGGSPLPSDESNLEPPATN 857
           SD QP     EP+N P     S     E N EPP  N
Sbjct: 210 SDNQPATDNVEPSNEPPTGSQSAEAGAEVNQEPPTRN 246


>05_01_0518 +
           4421314-4421346,4421427-4421767,4421960-4422619,
           4422992-4423116,4423337-4423692,4423768-4423852,
           4423917-4423954
          Length = 545

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 720 LALWTHNIVSDLQPQLLGKEPNNRPAANGGSPLPSDE 830
           L +W     S  + +L G E  + PA+ GG+ L S+E
Sbjct: 283 LPMWGGGASSSREEELAGMERRSSPASGGGALLASEE 319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,135,200
Number of Sequences: 37544
Number of extensions: 589083
Number of successful extensions: 1572
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)