Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G15
(1217 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 31 1.6
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 5.0
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 29 6.7
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 29 6.7
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 6.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 6.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 6.7
L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical p... 29 8.8
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 762 QLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNE 893
Q LGK P+ P P DES+ + P +G+GK+ +C E
Sbjct: 351 QNLGKSPSRMPTQLL-HPTGDDESDCDEPLLSGSGKVSQECKEE 393
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 762 QLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNE 893
Q LGK P+ P P DES+ + P +G+GK+ +C E
Sbjct: 351 QNLGKSPSRMPTQLL-HPTGDDESDCDEPLLSGSGKVSQECKEE 393
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 780 PNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCTEDSMDAK 935
P+ +PA+ SP P DE+ + PP+++ + + + + E T + T S+ K
Sbjct: 34 PHRKPASL--SPPPDDENTIRPPSSSESSENIPEEPQELITPNTTRRSLGPK 83
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 762 QLLG--KEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCT 914
QLLG KEP NRP + + + D ++P + K++ N + T CT
Sbjct: 748 QLLGAEKEPKNRPENDMDAVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCT 800
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 762 QLLG--KEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCT 914
QLLG KEP NRP + + + D ++P + K++ N + T CT
Sbjct: 748 QLLGAEKEPKNRPENDMDAVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCT 800
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 747 SDLQPQLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCTED 920
+D ++G + P G PL D S L P NGN L+ NE+TT T D
Sbjct: 6058 TDASGAVIGPDGEPIPTDASGKPLSQDGSLL-PTDNNGNYVLLPS--NEETTQGLTTD 6112
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 732 THNIVSDLQPQLLGKEPNNRPAANGGSPLPSDES-NLEPPATNGNGK 869
T + V+D Q++GK+ +P G LP+D+S N PA +G+
Sbjct: 3389 TGSFVTD-DGQIIGKDDEGKPLGPDGQVLPTDDSGNYIYPAVGPDGQ 3434
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 747 SDLQPQLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCTED 920
+D ++G + P G PL D S L P NGN L+ NE+TT T D
Sbjct: 6103 TDASGAVIGPDGEPIPTDASGKPLSQDGSLL-PTDNNGNYVLLPS--NEETTQGLTTD 6157
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 732 THNIVSDLQPQLLGKEPNNRPAANGGSPLPSDES-NLEPPATNGNGK 869
T + V+D Q++GK+ +P G LP+D+S N PA +G+
Sbjct: 3434 TGSFVTD-DGQIIGKDDEGKPLGPDGQVLPTDDSGNYIYPAVGPDGQ 3479
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 747 SDLQPQLLGKEPNNRPAANGGSPLPSDESNLEPPATNGNGKLVTDCVNEDTTTSCTED 920
+D ++G + P G PL D S L P NGN L+ NE+TT T D
Sbjct: 6103 TDASGAVIGPDGEPIPTDASGKPLSQDGSLL-PTDNNGNYVLLPS--NEETTQGLTTD 6157
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 732 THNIVSDLQPQLLGKEPNNRPAANGGSPLPSDES-NLEPPATNGNGK 869
T + V+D Q++GK+ +P G LP+D+S N PA +G+
Sbjct: 3434 TGSFVTD-DGQIIGKDDEGKPLGPDGQVLPTDDSGNYIYPAVGPDGQ 3479
>L15313-11|AAK68622.1| 208|Caenorhabditis elegans Hypothetical
protein ZK353.9 protein.
Length = 208
Score = 28.7 bits (61), Expect = 8.8
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +3
Query: 585 IPEMEGSDYTAREYLNFVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTHNIVSDLQPQ 764
IPE+ G D + ++++ + LNE +G GKK F M + + SD +
Sbjct: 15 IPEVPGDDVYRYDMVSYIDMEK--VTTLNESVDGAGKKVFKVMEKRDDRLEYVESDCDHE 72
Query: 765 LLGKEPNNRPAANGGSPLPSDESNLEP 845
LL P G + DE P
Sbjct: 73 LLFNIPFTGHVRLTGLSIIGDEDGSHP 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,217,448
Number of Sequences: 27780
Number of extensions: 465761
Number of successful extensions: 1456
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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