Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G14
(1230 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 256 6e-69
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 226 4e-60
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 182 1e-46
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 180 4e-46
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 161 2e-40
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 81 2e-16
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 73 8e-14
SPBC13G1.11 |ykt6||SNARE Ykt6|Schizosaccharomyces pombe|chr 2|||... 28 3.1
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 26 9.3
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 256 bits (626), Expect = 6e-69
Identities = 124/303 (40%), Positives = 177/303 (58%)
Frame = +3
Query: 78 IKSTKLFIDNEWVDAXAGXTFDTFSPHXGSVIAKVAKGQKXXXXXXXXXXXXXFQRNSXW 257
I+ LFI+N+ VD+ G +SP +I +VA + FQ ++ W
Sbjct: 20 IQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPW 79
Query: 258 RLADASQRGKLLYKFAXLIERXFEYLAKLESYDNGMVYKNCLRILSGIPDSVXYLGSLAD 437
R ++QRG+ L + A IE+ EYLA +E+ DNG + D Y G AD
Sbjct: 80 RKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWAD 139
Query: 438 KIQGDTIPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQT 617
K G TI TD F+YT +P+GVCG I+PWN P LM K+ A+A G T+++K AE T
Sbjct: 140 KDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELT 199
Query: 618 PLTXXXXXXXXKEAGIPKGVVNIVPGFGEDAGVALTHHPDVAKISFTGSLEVGKLIQKAA 797
PL+ E G P GV+N++ G G G A++ H D+ K++FTGS VG+++ +AA
Sbjct: 200 PLSALCLTKFVPECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAA 259
Query: 798 GTNNLKRVTLELGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDK 977
++NLK+VTLELGGKSP I+ NDADL+ A + G+F++ GQ+C A SR YV +YD+
Sbjct: 260 ASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAGSRVYVQEDVYDE 319
Query: 978 FVK 986
F+K
Sbjct: 320 FIK 322
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 226 bits (553), Expect = 4e-60
Identities = 119/299 (39%), Positives = 171/299 (57%), Gaps = 1/299 (0%)
Frame = +3
Query: 93 LFIDNEWVDAXAGXTFDTFSPHXGSVIAKVAKGQKXXXXXXXXXXXXXFQRNSXWRLADA 272
L+I+ EW + T++T P VIAKV + F+ W+
Sbjct: 23 LYINGEW--HKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT---WKKVPG 77
Query: 273 SQRGKLLYKFAXLIERXFEYLAKLESYDNGM-VYKNCLRILSGIPDSVXYLGSLADKIQG 449
S++G+LL K A L E+ + LA +E+ D+G + N + G + Y ADKI G
Sbjct: 78 SEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYG 137
Query: 450 DTIPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTX 629
IPT + +Y + P+GVCG I+PWN P+ M K+ ALAAG +++K AE TPL+
Sbjct: 138 QVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSL 197
Query: 630 XXXXXXXKEAGIPKGVVNIVPGFGEDAGVALTHHPDVAKISFTGSLEVGKLIQKAAGTNN 809
+EAG PKGVVNI+ G G AG + HP + KI+FTGS +VG ++Q+ A +N
Sbjct: 198 LYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLA-ASN 256
Query: 810 LKRVTLELGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDKFVK 986
LK VTLE GGKSP ++ DADL+ A+ +A G+ ++ GQIC + SR YV +YDKF++
Sbjct: 257 LKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIE 315
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 182 bits (442), Expect = 1e-46
Identities = 109/307 (35%), Positives = 159/307 (51%), Gaps = 5/307 (1%)
Frame = +3
Query: 93 LFIDNEWVDAX--AGXTFDTFSPHXGSVIAKVAKGQKXXXXXXXXXXXXXFQRNSXWRLA 266
LFID ++V A +P +I A F R+ W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF-RSGIWAKW 81
Query: 267 DASQRGKLLYKFAXLIERXFEYLAKLESYDNGMVYKNCLRILSGIPDSVXYLGSLADKIQ 446
QRG +L K A ++ E LA +++ + G L + D Y +A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVAETDN 141
Query: 447 GDT---IPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQT 617
+P + ++ + P GV G+I PWN P+ M L K+V A+A+G VV+KP+E
Sbjct: 142 PTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELA 201
Query: 618 PLTXXXXXXXXKEAGIPKGVVNIVPGFGEDAGVALTHHPDVAKISFTGSLEVGKLIQKAA 797
P + KEAG+P GV+N++ G G+++G AL+ HP +A ++FTGSL GK I AA
Sbjct: 202 PWSCLEFALICKEAGLPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHAA 261
Query: 798 GTNNLKRVTLELGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDK 977
N+ +TLELGGKSPLII DADL+LAIP A +FF+QG+ C AASR V + D+
Sbjct: 262 -AENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRLIVHESVADE 320
Query: 978 FVKGXLN 998
+ G ++
Sbjct: 321 VLGGLVS 327
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 180 bits (438), Expect = 4e-46
Identities = 113/334 (33%), Positives = 174/334 (52%), Gaps = 6/334 (1%)
Frame = +3
Query: 96 FIDNEWVDAXAGXTFDTFSPHXGSVIAKVAKGQKXXXXXXXXXXXXXFQRNSXWRLADAS 275
+I +WV A +G TFD +P +A V F +R +D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFLS---YRNSDIK 83
Query: 276 QRGKLLYKFAXLIERXFEYLAKLESYDNGMVYKNCLRILSGIPDSVXYLGSLADKIQGDT 455
+R +L ++ LI + LA + + +NG + + + + A +I GD+
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDS 143
Query: 456 -IPTDGDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTXX 632
+ ++ + T+KQPVGV G+I PWN P M KV ALAAGCTVV++PA +TP T
Sbjct: 144 SMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTAL 203
Query: 633 XXXXXXKEAGIPKGVVNIVPGFG-EDAGVALTHHPDVAKISFTGSLEVGKLIQKAAGTNN 809
+ AG+P GV+N+V + G+ LT +P + K+SFTGS VGK++ K + ++
Sbjct: 204 ALAKLAERAGVPAGVLNMVTANSPSEHGIELTTNPLIRKVSFTGSTNVGKILAKQS-SST 262
Query: 810 LKRVTLELGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDKFVKG 989
LK+++LELGG +P I+ DADL A + F GQ CV A+R YV S +YD FV
Sbjct: 263 LKKLSLELGGNAPFIVFEDADLEKAADALMACKFRGSGQTCVCANRIYVHSSVYDAFV-- 320
Query: 990 XLNMQKLS----GFGIF*XINCNGPQXDESMMNK 1079
L +++S G+G+ + +GP E ++K
Sbjct: 321 DLVTERVSKFKLGYGLDAGVT-HGPLISEKAISK 353
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 161 bits (391), Expect = 2e-40
Identities = 96/299 (32%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Frame = +3
Query: 96 FIDNEWVDAXAGXTFDTFSPHXGSVIAKVAKGQKXXXXXXXXXXXXXFQRNSXWRLADAS 275
F+ +W+ + TF+ +P G +I KVA F+ +
Sbjct: 21 FVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKTYKNFTHV--- 77
Query: 276 QRGKLLYKFAXLIERXFEYLAKLESYDNGMVYKNCLRILSGIPDSVXYLGSLADKIQGDT 455
QR +LL ++A LI + L K+ + +NG ++ + + + A + GD
Sbjct: 78 QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDV 137
Query: 456 IPTD--GDSFSYTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTX 629
P+ +F ++KQPVGV LI PWN P M K ALAAGCT + PA +TP
Sbjct: 138 APSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVC 197
Query: 630 XXXXXXXKEAGIPKGVVNIVPGFGEDA-GVALTHHPDVAKISFTGSLEVGKLIQKAAGTN 806
+EAG P GV+N++ A G LT +P V K+SFTGS VGK++ +
Sbjct: 198 LGLVRLAQEAGFPDGVLNVITSSDASAHGKELTTNPIVRKVSFTGSTNVGKILM-GQSAS 256
Query: 807 NLKRVTLELGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDKFV 983
+K+V++ELGG +P I+ D ++ A+ + F GQ+CV +R YV +YD+FV
Sbjct: 257 TIKKVSMELGGNAPFIVFPDFPIDQAVESFCTIKFNSCGQVCVCPNRVYVHKNVYDEFV 315
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 522
Score = 81.4 bits (192), Expect = 2e-16
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 4/186 (2%)
Frame = +3
Query: 483 YTLKQPVGVCGLILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTXXXXXXXXKEA- 659
Y +P+GV ++ WN P+ L +++AL AG +VVK +E T + +
Sbjct: 122 YVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLL 181
Query: 660 ---GIPKGVVNIVPGFGEDAGVALTHHPDVAKISFTGSLEVGKLIQKAAGTNNLKRVTLE 830
G +V + D LT H + I+F GS + KL+ A+ L + LE
Sbjct: 182 QSMGHSPELVQCITCL-PDVADHLTSHSGIKHITFIGSQPIAKLVA-ASAAKQLTPLCLE 239
Query: 831 LGGKSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDKFVKGXLNMQKL 1010
LGGK P I+ +D L + GVF GQ C+ R G+YD + N
Sbjct: 240 LGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRIST 299
Query: 1011 SGFGIF 1028
G++
Sbjct: 300 MRLGMY 305
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 72.9 bits (171), Expect = 8e-14
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Frame = +3
Query: 519 ILPWNVPILMFLNKVVTALAAGCTVVVKPAEQTPLTXXXXXXXXKEAGIPKGVVNIVPGF 698
I P+N + N L G V++KP++ L+ +EAG+P G + +PG
Sbjct: 189 ITPFNFTAIAG-NLAAAPLLMGNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGD 247
Query: 699 GEDAGVALTHHPDVAKISFTGSLEVGKLIQKAAGTN-------NLKRVTLELGGKSPLII 857
+ +HP+ A + FTGS V + + G N ++ E GGK+ ++
Sbjct: 248 AVEVSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRTYPKIVGETGGKNFHLV 307
Query: 858 MNDADLNLAIPYAGSGVFFHQGQICVAASRXYVXSGIYDKFVKGXLNMQKLS---GFGIF 1028
+ A++ A+ A F +QGQ C A SR YV ++ + L Q S G +
Sbjct: 308 HSSAEIKSAVVNAVRAAFEYQGQKCSALSRLYVSKYAWENGFRDELTKQVKSLKVGAPLT 367
Query: 1029 *XINCNGPQXDESMMNK 1079
N GP ++ NK
Sbjct: 368 DFANFVGPVIHQASFNK 384
>SPBC13G1.11 |ykt6||SNARE Ykt6|Schizosaccharomyces pombe|chr
2|||Manual
Length = 197
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 830 FESDTLQIVCSSCLLDQFAYLQRSCKGNFGN 738
F+ +Q++C++ L F++ QRS G F N
Sbjct: 11 FDPKPVQLLCTASDLSSFSFFQRSSIGEFMN 41
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 26.2 bits (55), Expect = 9.3
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 184 PKXKRL-ILTPQWQRRSVRSNVTQXGGWRMPRSAENYFTSSQXLLNAXSNILRNSSHMTM 360
P+ RL L QW + + ++ EN+F + + L+N + N H+
Sbjct: 428 PRQLRLAFLLQQWNTQLDFKETLLAYVLNIEQALENFFRTVRALMNETEGVSANGGHVPE 487
Query: 361 AWFIKIALEYFQEF 402
F K+ +E ++F
Sbjct: 488 K-FDKLEIELLEKF 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,518,479
Number of Sequences: 5004
Number of extensions: 89687
Number of successful extensions: 240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 667380970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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