Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G12
(1218 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051887-1|AAK93311.1| 782|Drosophila melanogaster LD37409p pro... 264 2e-70
AE014297-545|AAF54073.1| 782|Drosophila melanogaster CG1104-PA,... 264 2e-70
AE014297-546|AAN13356.1| 739|Drosophila melanogaster CG1104-PB,... 198 2e-50
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro... 29 9.7
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P... 29 9.7
>AY051887-1|AAK93311.1| 782|Drosophila melanogaster LD37409p protein.
Length = 782
Score = 264 bits (647), Expect = 2e-70
Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 2/259 (0%)
Frame = +1
Query: 247 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 426
+DWDEIKRLAADFQKAQL++T Q+LSERNC+EIVT L+E ++++V+FTNDGKEY+T L
Sbjct: 3 SDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPDHL 62
Query: 427 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VKGKDVQLISGYLITNYYLEK 603
+E++DELYV+GGR N V+++K LNVD + I I + + V L+ G LI Y+
Sbjct: 63 EREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYISH 122
Query: 604 IAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLGKIIIGKQDPSEPRTFYTDE 783
IA+E+NEKL +G +S+ EL +DLP+D +QH V+EK LGKII G+QD S PR F+T
Sbjct: 123 IAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDASNPRVFFTQA 182
Query: 784 YITRTKAKIRGALMGLLKPTPIAVIVNHCNLSDRLXLSLFDQLNAPGVLPGKQAGAIYVP 963
YI R KAKIRGAL + +P +AVI+ + +++ SL D++ G + KQA + YVP
Sbjct: 183 YIQRCKAKIRGALAAITRPINVAVILQKIGVQEKIFYSLLDEIAPAGQVTSKQANSQYVP 242
Query: 964 SSYTSXK*XG-NKFLQQNT 1017
Y + N F +QN+
Sbjct: 243 HIYAKTQADWVNSFYKQNS 261
>AE014297-545|AAF54073.1| 782|Drosophila melanogaster CG1104-PA,
isoform A protein.
Length = 782
Score = 264 bits (647), Expect = 2e-70
Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 2/259 (0%)
Frame = +1
Query: 247 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 426
+DWDEIKRLAADFQKAQL++T Q+LSERNC+EIVT L+E ++++V+FTNDGKEY+T L
Sbjct: 3 SDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPDHL 62
Query: 427 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VKGKDVQLISGYLITNYYLEK 603
+E++DELYV+GGR N V+++K LNVD + I I + + V L+ G LI Y+
Sbjct: 63 EREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYISH 122
Query: 604 IAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLGKIIIGKQDPSEPRTFYTDE 783
IA+E+NEKL +G +S+ EL +DLP+D +QH V+EK LGKII G+QD S PR F+T
Sbjct: 123 IAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDASNPRVFFTQA 182
Query: 784 YITRTKAKIRGALMGLLKPTPIAVIVNHCNLSDRLXLSLFDQLNAPGVLPGKQAGAIYVP 963
YI R KAKIRGAL + +P +AVI+ + +++ SL D++ G + KQA + YVP
Sbjct: 183 YIQRCKAKIRGALAAITRPINVAVILQKIGVQEKIFYSLLDEIAPAGQVTSKQANSQYVP 242
Query: 964 SSYTSXK*XG-NKFLQQNT 1017
Y + N F +QN+
Sbjct: 243 HIYAKTQADWVNSFYKQNS 261
>AE014297-546|AAN13356.1| 739|Drosophila melanogaster CG1104-PB,
isoform B protein.
Length = 739
Score = 198 bits (482), Expect = 2e-50
Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 2/218 (0%)
Frame = +1
Query: 370 LIDVIFTNDGKEYLTSLQLIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEI-VK 546
+++V+FTNDGKEY+T L +E++DELYV+GGR N V+++K LNVD + I I +
Sbjct: 1 MLEVVFTNDGKEYITPDHLEREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAE 60
Query: 547 GKDVQLISGYLITNYYLEKIAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEKFLG 726
+ V L+ G LI Y+ IA+E+NEKL +G +S+ EL +DLP+D +QH V+EK LG
Sbjct: 61 NQSVHLVLGQLIDEDYISHIAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLG 120
Query: 727 KIIIGKQDPSEPRTFYTDEYITRTKAKIRGALMGLLKPTPIAVIVNHCNLSDRLXLSLFD 906
KII G+QD S PR F+T YI R KAKIRGAL + +P +AVI+ + +++ SL D
Sbjct: 121 KIIKGRQDASNPRVFFTQAYIQRCKAKIRGALAAITRPINVAVILQKIGVQEKIFYSLLD 180
Query: 907 QLNAPGVLPGKQAGAIYVPSSYTSXK*XG-NKFLQQNT 1017
++ G + KQA + YVP Y + N F +QN+
Sbjct: 181 EIAPAGQVTSKQANSQYVPHIYAKTQADWVNSFYKQNS 218
>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
Length = 1654
Score = 29.5 bits (63), Expect = 9.7
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -2
Query: 539 ISGMCVV--MWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFVKITSI-N 369
I +C + +W T L ++++F+RP TY+ + F+ + SL + + +
Sbjct: 939 IPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQG 998
Query: 368 LSSINFVTISIQFRSDNL 315
+ + + I+ R +NL
Sbjct: 999 MCYVMNIKDYIKMRPENL 1016
>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
protein.
Length = 1654
Score = 29.5 bits (63), Expect = 9.7
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -2
Query: 539 ISGMCVV--MWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFVKITSI-N 369
I +C + +W T L ++++F+RP TY+ + F+ + SL + + +
Sbjct: 939 IPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQG 998
Query: 368 LSSINFVTISIQFRSDNL 315
+ + + I+ R +NL
Sbjct: 999 MCYVMNIKDYIKMRPENL 1016
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,648,005
Number of Sequences: 53049
Number of extensions: 886290
Number of successful extensions: 1789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6478647390
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -