Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G11
(1229 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.008
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.008
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.008
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.078
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.078
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.55
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.72
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.72
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.72
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.3
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 31 2.2
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 8.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 8.9
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 39.1 bits (87), Expect = 0.006
Identities = 29/95 (30%), Positives = 31/95 (32%), Gaps = 3/95 (3%)
Frame = +1
Query: 718 SXXXPPPXXXQKKXAXXXXGGXPXGXXKNPGX---PPXKPPXGXXFXXPAXXXKXXPFFP 888
S PPP + GG P PG PP P G P+ P P
Sbjct: 347 SFGAPPPQQFHAP-SPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGA--PQGP 403
Query: 889 XGKGGXXXXPPXGXXXXGGGXPPXGGXXXXPPXXP 993
G GG PP G G PP GG P P
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.008
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Frame = +2
Query: 530 GXXPXPPXKKPXPPVXGGGXGVXPPXXXXXXXPQKRGETXXKXXXKXGPKRXXTXKRXXX 709
G P PP K PP+ G G PP P + G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 710 GGFPXXPPPPKXXK---KKXPXXXGGEXPGXXKKTXGFPPXNPXGAP 841
G P PPPP+ P GG P + PP AP
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
Score = 33.9 bits (74), Expect = 0.24
Identities = 44/196 (22%), Positives = 50/196 (25%), Gaps = 15/196 (7%)
Frame = +2
Query: 497 PXPRGXGGXXXGXXPXPPXK--KPXPPVXGG----GXGVXPPXXXXXXXPQKRGETXXKX 658
P P+G P PP P PP G G PP P R +
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 659 XXKXGPKRXXTXKRXXXGGFP-----XXPPPPKXXKKKXPXXXGGEXPGXXKKTXGFPPX 823
G + GG P PPPP K++ P P G PP
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE----RSPPTGSPPTGSPPT 356
Query: 824 N--PXGAPXXPXXXXXXKXXPFSXGERGGXXXXXXXXXXXXXXXXXXXXXXXKXPP--XX 991
P G P G RGG + PP
Sbjct: 357 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSP 416
Query: 992 PXGGPXXGXXXXXKPP 1039
P G P G PP
Sbjct: 417 PTGSPPTGRPPRGSPP 432
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 933 PXGGRXPPXRGXGXXPPPXXPXGXPFXGKXXXXNPPP 1043
P GG PP R G PPP P G P G PPP
Sbjct: 284 PAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.008
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Frame = +2
Query: 530 GXXPXPPXKKPXPPVXGGGXGVXPPXXXXXXXPQKRGETXXKXXXKXGPKRXXTXKRXXX 709
G P PP K PP+ G G PP P + G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 710 GGFPXXPPPPKXXK---KKXPXXXGGEXPGXXKKTXGFPPXNPXGAP 841
G P PPPP+ P GG P + PP AP
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
Score = 33.9 bits (74), Expect = 0.24
Identities = 44/196 (22%), Positives = 50/196 (25%), Gaps = 15/196 (7%)
Frame = +2
Query: 497 PXPRGXGGXXXGXXPXPPXK--KPXPPVXGG----GXGVXPPXXXXXXXPQKRGETXXKX 658
P P+G P PP P PP G G PP P R +
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 659 XXKXGPKRXXTXKRXXXGGFP-----XXPPPPKXXKKKXPXXXGGEXPGXXKKTXGFPPX 823
G + GG P PPPP K++ P P G PP
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE----RSPPTGSPPTGSPPT 377
Query: 824 N--PXGAPXXPXXXXXXKXXPFSXGERGGXXXXXXXXXXXXXXXXXXXXXXXKXPP--XX 991
P G P G RGG + PP
Sbjct: 378 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSP 437
Query: 992 PXGGPXXGXXXXXKPP 1039
P G P G PP
Sbjct: 438 PTGSPPTGRPPRGSPP 453
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 933 PXGGRXPPXRGXGXXPPPXXPXGXPFXGKXXXXNPPP 1043
P GG PP R G PPP P G P G PPP
Sbjct: 305 PAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.008
Identities = 28/107 (26%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Frame = +2
Query: 530 GXXPXPPXKKPXPPVXGGGXGVXPPXXXXXXXPQKRGETXXKXXXKXGPKRXXTXKRXXX 709
G P PP K PP+ G G PP P + G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSG-SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 710 GGFPXXPPPPKXXK---KKXPXXXGGEXPGXXKKTXGFPPXNPXGAP 841
G P PPPP+ P GG P + PP AP
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
Score = 33.9 bits (74), Expect = 0.24
Identities = 44/196 (22%), Positives = 50/196 (25%), Gaps = 15/196 (7%)
Frame = +2
Query: 497 PXPRGXGGXXXGXXPXPPXK--KPXPPVXGG----GXGVXPPXXXXXXXPQKRGETXXKX 658
P P+G P PP P PP G G PP P R +
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 659 XXKXGPKRXXTXKRXXXGGFP-----XXPPPPKXXKKKXPXXXGGEXPGXXKKTXGFPPX 823
G + GG P PPPP K++ P P G PP
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE----RSPPTGSPPTGSPPT 362
Query: 824 N--PXGAPXXPXXXXXXKXXPFSXGERGGXXXXXXXXXXXXXXXXXXXXXXXKXPP--XX 991
P G P G RGG + PP
Sbjct: 363 GRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSP 422
Query: 992 PXGGPXXGXXXXXKPP 1039
P G P G PP
Sbjct: 423 PTGSPPTGRPPRGSPP 438
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 933 PXGGRXPPXRGXGXXPPPXXPXGXPFXGKXXXXNPPP 1043
P GG PP R G PPP P G P G PPP
Sbjct: 290 PAGGSPPPPRA-GSPPPPPPPRGSPPTGSL----PPP 321
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.078
Identities = 28/91 (30%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Frame = +1
Query: 814 PPXKPPXGXXFXXPAXXXKXXP-----FFPXGKGGXXXXPPXGXXXXGGGXPPXGGXXXX 978
PP PP G P P F P G GG PP G GG PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP------P 351
Query: 979 PPXXPXXGXXFXXKXXXKTPPPXKKXXXPXG 1071
PP P G PPP + P G
Sbjct: 352 PPRYPSAGPGM-----YPPPPPSRPPAPPSG 377
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.078
Identities = 28/91 (30%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Frame = +1
Query: 814 PPXKPPXGXXFXXPAXXXKXXP-----FFPXGKGGXXXXPPXGXXXXGGGXPPXGGXXXX 978
PP PP G P P F P G GG PP G GG PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP------P 361
Query: 979 PPXXPXXGXXFXXKXXXKTPPPXKKXXXPXG 1071
PP P G PPP + P G
Sbjct: 362 PPRYPSAGPGM-----YPPPPPSRPPAPPSG 387
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.55
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +1
Query: 730 PPPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXX 909
PPP Q A G PP PP G P P F G+GG
Sbjct: 743 PPPMFQQGFNAGAPPPPFGRGAGPMSSFPP--PPRGGMHHMPPP-----PSFRGGRGGHG 795
Query: 910 XXPPXGXXXXGGGXPP 957
PP GGG PP
Sbjct: 796 GPPPPHFDRRGGGGPP 811
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.72
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +1
Query: 784 PXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXP---FFPXGKGGXXXXPPXGXXXXGGGXP 954
P G G PP PP G P P G PP G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 955 PXGGXXXXPPXXPXXG 1002
P GG PP P G
Sbjct: 776 PPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.96
Identities = 28/108 (25%), Positives = 28/108 (25%), Gaps = 4/108 (3%)
Frame = +1
Query: 733 PPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXXX 912
PP A G G PP P P P G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Query: 913 XPPXGXXXXGGG----XPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPP 1044
PP G GG PP GG PP P G K PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 1.3
Identities = 28/108 (25%), Positives = 29/108 (26%)
Frame = +1
Query: 730 PPPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXX 909
PPP P G G PP PP G P P P G G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPG-GCPP 770
Query: 910 XXPPXGXXXXGGGXPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPPXKK 1053
PP GG PP P P K K P +K
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRK 818
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 965 PPXGGXPPPXXXXPXGGF 912
PP GG PPP P GGF
Sbjct: 763 PPPGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.72
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +1
Query: 784 PXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXP---FFPXGKGGXXXXPPXGXXXXGGGXP 954
P G G PP PP G P P G PP G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 955 PXGGXXXXPPXXPXXG 1002
P GG PP P G
Sbjct: 776 PPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.96
Identities = 28/108 (25%), Positives = 28/108 (25%), Gaps = 4/108 (3%)
Frame = +1
Query: 733 PPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXXX 912
PP A G G PP P P P G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Query: 913 XPPXGXXXXGGG----XPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPP 1044
PP G GG PP GG PP P G K PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 1.3
Identities = 28/108 (25%), Positives = 29/108 (26%)
Frame = +1
Query: 730 PPPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXX 909
PPP P G G PP PP G P P P G G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPG-GCPP 770
Query: 910 XXPPXGXXXXGGGXPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPPXKK 1053
PP GG PP P P K K P +K
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRK 818
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 965 PPXGGXPPPXXXXPXGGF 912
PP GG PPP P GGF
Sbjct: 763 PPPGGCPPPPPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.72
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +1
Query: 784 PXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXP---FFPXGKGGXXXXPPXGXXXXGGGXP 954
P G G PP PP G P P G PP G P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 955 PXGGXXXXPPXXPXXG 1002
P GG PP P G
Sbjct: 359 PPGGFKGGPPPPPPPG 374
Score = 31.9 bits (69), Expect = 0.96
Identities = 28/108 (25%), Positives = 28/108 (25%), Gaps = 4/108 (3%)
Frame = +1
Query: 733 PPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXXX 912
PP A G G PP P P P G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Query: 913 XPPXGXXXXGGG----XPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPP 1044
PP G GG PP GG PP P G K PPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPPPPPP 372
Score = 31.5 bits (68), Expect = 1.3
Identities = 28/108 (25%), Positives = 29/108 (26%)
Frame = +1
Query: 730 PPPXXXQKKXAXXXXGGXPXGXXKNPGXPPXKPPXGXXFXXPAXXXKXXPFFPXGKGGXX 909
PPP P G G PP PP G P P P G G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPG-GCPP 353
Query: 910 XXPPXGXXXXGGGXPPXGGXXXXPPXXPXXGXXFXXKXXXKTPPPXKK 1053
PP GG PP P P K K P +K
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRK 401
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 965 PPXGGXPPPXXXXPXGGF 912
PP GG PPP P GGF
Sbjct: 346 PPPGGCPPPPPPPPPGGF 363
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 503 PRGXGGXXXGXXPXPPXKKPXPPVXGGGXGVXPP 604
PRG G P PP +P P GGG G+ PP
Sbjct: 783 PRGGPGA-----PPPPGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 503 PRGXGGXXXGXXPXPPXKKPXPPVXGGGXGVXPP 604
PRG G P PP +P P GGG G+ PP
Sbjct: 783 PRGGPGA-----PPPPGMRPPPGAPGGGGGMYPP 811
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +3
Query: 933 PXGGRX---PPXRGXGXXPPP--XXPXGXPFXGKXXXXNPPPXKKKXXPXGXXP 1079
P GGR PP G G PPP P G P G PP + P G P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP--GGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 503 PRGXGGXXXGXXPXPPXKKPXPPVXGGGXGVXPP 604
PRG G P PP +P P GGG G+ PP
Sbjct: 783 PRGGPGA-----PPPPGMRPPPGAPGGGGGMYPP 811
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +3
Query: 933 PXGGRX---PPXRGXGXXPPP--XXPXGXPFXGKXXXXNPPPXKKKXXPXGXXP 1079
P GGR PP G G PPP P G P G PP + P G P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP--GGGGGMYPPLIPTRPGPGGPPP 824
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 503 PRGXGGXXXGXXPXPPXKKPXPPVXGGGXGVXPP 604
PRG G P PP +P P GGG G+ PP
Sbjct: 783 PRGGPGA-----PPPPGMRPPPGAPGGGGGMYPP 811
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 30.7 bits (66), Expect = 2.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 460 GGGGGVXXXXKXPPPPGXXGXXXGXP 537
GGGGGV P PPG G G P
Sbjct: 514 GGGGGVPMIPMVPMPPGMIGLPPGPP 539
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 509 GXGGXXXGXXPXPPXKKPXPPVXGGGXGVXPP 604
G GG G P PP P PP G G PP
Sbjct: 25 GGGGCGCGAPPPPPACAP-PPAPACGGGAPPP 55
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 569 GAXVFXGGEXXGXPXXXPXXPGGGGFFXXXKTPPPPP 459
G GG G GGGG+ PPPPP
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 569 GAXVFXGGEXXGXPXXXPXXPGGGGFFXXXKTPPPPP 459
G GG G GGGG+ PPPPP
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 591 PXPPP*TGGXGFXXGGXGXXPXXXPPXPRGXG 496
P PPP G G G P PP P G G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 591 PXPPP*TGGXGFXXGGXGXXPXXXPPXPRGXG 496
P PPP G G G P PP P G G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.152 0.518
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,303,802
Number of Sequences: 27780
Number of extensions: 318481
Number of successful extensions: 1033
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3401633308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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