Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G10
         (1246 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    31   0.053
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    27   0.86 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   4.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 31.5 bits (68), Expect = 0.053
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 484 VVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNEIVXACIXEQGNFYVHEIEATDSG 651
           V Y ++ G D R +I    GE+     A +   ++       G+ YV E+ ATD G
Sbjct: 777 VTYRIQQGGDGRFVIGASTGEISITHGASLDPNLLAPDALGSGSTYVLEVFATDGG 832


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 427 YSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNE 582
           Y +KAPN       SG  + + N   GT  +    G+KG V ++S A +QNE
Sbjct: 31  YDVKAPNMFKNRQ-SG--KTLVNRTQGT--KIASDGLKGRVFEVSLADLQNE 77


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 667  LVYISVRCQLLQSHEHKSCPVHXCKPILSRF 575
            L+Y+S+      SHE  S P+H  +PI++ +
Sbjct: 1076 LLYVSI-----DSHEEDSGPIHNFRPIVAAY 1101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,621
Number of Sequences: 2352
Number of extensions: 13108
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142243956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)