Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G10
         (1246 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L26339-1|AAA21833.1| 1215|Homo sapiens autoantigen protein.            92   4e-18
BC064567-1|AAH64567.1| 1401|Homo sapiens enhancer of mRNA decapp...    92   4e-18
BC043616-1|AAH43616.1| 1401|Homo sapiens enhancer of mRNA decapp...    92   4e-18

>L26339-1|AAA21833.1| 1215|Homo sapiens autoantigen protein.
          Length = 1215

 Score = 91.9 bits (218), Expect = 4e-18
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
 Frame = +1

Query: 196 TMLPKLSDTTQTIAFAEGDGMSCXXVYSXDVVXTINT----GNHDHGSSXVKLKNLVDYT 363
           TM P      Q I  +  D  +C  + + +V    ++     +   GS+ VK++ +  Y 
Sbjct: 68  TMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKIQPVAKYD 127

Query: 364 WEPKXYPAQLLAIHISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKG 543
           WE K Y   L+A+  S   LAY+I+A N       S MVRV+      T  R L+KG  G
Sbjct: 128 WEQKYYYGNLIAV--SNSFLAYAIRAANNG-----SAMVRVI---SVSTSERTLLKGFTG 177

Query: 544 EVQDLSFAHIQNEIVXACIXEQGNFYVHEIEATDSGLRCTLIXEXRXXTGI-VGSFHRVV 720
            V DL+FAH+ N    AC+ E GN +V  +   +  ++  ++   R   G  +  F R++
Sbjct: 178 SVADLAFAHL-NSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRII 236

Query: 721 WCPYI 735
           WCP+I
Sbjct: 237 WCPFI 241


>BC064567-1|AAH64567.1| 1401|Homo sapiens enhancer of mRNA decapping
           4 protein.
          Length = 1401

 Score = 91.9 bits (218), Expect = 4e-18
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
 Frame = +1

Query: 196 TMLPKLSDTTQTIAFAEGDGMSCXXVYSXDVVXTINT----GNHDHGSSXVKLKNLVDYT 363
           TM P      Q I  +  D  +C  + + +V    ++     +   GS+ VK++ +  Y 
Sbjct: 68  TMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKIQPVAKYD 127

Query: 364 WEPKXYPAQLLAIHISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKG 543
           WE K Y   L+A+  S   LAY+I+A N       S MVRV+      T  R L+KG  G
Sbjct: 128 WEQKYYYGNLIAV--SNSFLAYAIRAANNG-----SAMVRVI---SVSTSERTLLKGFTG 177

Query: 544 EVQDLSFAHIQNEIVXACIXEQGNFYVHEIEATDSGLRCTLIXEXRXXTGI-VGSFHRVV 720
            V DL+FAH+ N    AC+ E GN +V  +   +  ++  ++   R   G  +  F R++
Sbjct: 178 SVADLAFAHL-NSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRII 236

Query: 721 WCPYI 735
           WCP+I
Sbjct: 237 WCPFI 241


>BC043616-1|AAH43616.1| 1401|Homo sapiens enhancer of mRNA decapping
           4 protein.
          Length = 1401

 Score = 91.9 bits (218), Expect = 4e-18
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
 Frame = +1

Query: 196 TMLPKLSDTTQTIAFAEGDGMSCXXVYSXDVVXTINT----GNHDHGSSXVKLKNLVDYT 363
           TM P      Q I  +  D  +C  + + +V    ++     +   GS+ VK++ +  Y 
Sbjct: 68  TMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKIQPVAKYD 127

Query: 364 WEPKXYPAQLLAIHISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKG 543
           WE K Y   L+A+  S   LAY+I+A N       S MVRV+      T  R L+KG  G
Sbjct: 128 WEQKYYYGNLIAV--SNSFLAYAIRAANNG-----SAMVRVI---SVSTSERTLLKGFTG 177

Query: 544 EVQDLSFAHIQNEIVXACIXEQGNFYVHEIEATDSGLRCTLIXEXRXXTGI-VGSFHRVV 720
            V DL+FAH+ N    AC+ E GN +V  +   +  ++  ++   R   G  +  F R++
Sbjct: 178 SVADLAFAHL-NSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRII 236

Query: 721 WCPYI 735
           WCP+I
Sbjct: 237 WCPFI 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,568,228
Number of Sequences: 237096
Number of extensions: 1908190
Number of successful extensions: 2673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17724886060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)