Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G10
         (1246 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p pro...   113   4e-25
AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB...   113   4e-25
AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA...   113   4e-25

>BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p
           protein.
          Length = 1354

 Score =  113 bits (273), Expect = 4e-25
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
 Frame = +1

Query: 226 QTIAFAEGDGMSCXXVYSXDVVXTINTGNHDHGSSXVKLKNLVDYTWEPK-XYPAQLLAI 402
           + I F   +   C  + S       + G H  GSS VKLKN+VDY WE K  YP  L+A+
Sbjct: 87  EVIHFQAQEKQCCRVIRSNKTKVLTSGGVHTRGSSKVKLKNIVDYKWERKYYYPGHLVAV 146

Query: 403 HISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNE 582
           H  GK LAY+I   N A      GMVRV  N+   T  RALIKGM GEV DL FAH   E
Sbjct: 147 HRDGKHLAYAINVNNKAT--GMEGMVRVC-NI--ATSMRALIKGMSGEVLDLQFAHTDCE 201

Query: 583 IVXACIXEQGNFYVHEIEATDSGLRCTLIXEXR-XXTGIVGSFHRVVWCPYI 735
            + A I +  + +V++++  +  L C L+ +        V  +  V WCPY+
Sbjct: 202 RILAVI-DVSSLFVYKVDQIEGNLLCNLVLKVEDPIANYVPEYDMVSWCPYV 252


>AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB,
           isoform B protein.
          Length = 1354

 Score =  113 bits (273), Expect = 4e-25
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
 Frame = +1

Query: 226 QTIAFAEGDGMSCXXVYSXDVVXTINTGNHDHGSSXVKLKNLVDYTWEPK-XYPAQLLAI 402
           + I F   +   C  + S       + G H  GSS VKLKN+VDY WE K  YP  L+A+
Sbjct: 87  EVIHFQAQEKQCCRVIRSNKTKVLTSGGVHTRGSSKVKLKNIVDYKWERKYYYPGHLVAV 146

Query: 403 HISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNE 582
           H  GK LAY+I   N A      GMVRV  N+   T  RALIKGM GEV DL FAH   E
Sbjct: 147 HRDGKHLAYAINVNNKAT--GMEGMVRVC-NI--ATSMRALIKGMSGEVLDLQFAHTDCE 201

Query: 583 IVXACIXEQGNFYVHEIEATDSGLRCTLIXEXR-XXTGIVGSFHRVVWCPYI 735
            + A I +  + +V++++  +  L C L+ +        V  +  V WCPY+
Sbjct: 202 RILAVI-DVSSLFVYKVDQIEGNLLCNLVLKVEDPIANYVPEYDMVSWCPYV 252


>AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA,
           isoform A protein.
          Length = 1354

 Score =  113 bits (273), Expect = 4e-25
 Identities = 68/172 (39%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
 Frame = +1

Query: 226 QTIAFAEGDGMSCXXVYSXDVVXTINTGNHDHGSSXVKLKNLVDYTWEPK-XYPAQLLAI 402
           + I F   +   C  + S       + G H  GSS VKLKN+VDY WE K  YP  L+A+
Sbjct: 87  EVIHFQAQEKQCCRVIRSNKTKVLTSGGVHTRGSSKVKLKNIVDYKWERKYYYPGHLVAV 146

Query: 403 HISGKCLAYSIKAPNTANPXTCSGMVRVVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNE 582
           H  GK LAY+I   N A      GMVRV  N+   T  RALIKGM GEV DL FAH   E
Sbjct: 147 HRDGKHLAYAINVNNKAT--GMEGMVRVC-NI--ATSMRALIKGMSGEVLDLQFAHTDCE 201

Query: 583 IVXACIXEQGNFYVHEIEATDSGLRCTLIXEXR-XXTGIVGSFHRVVWCPYI 735
            + A I +  + +V++++  +  L C L+ +        V  +  V WCPY+
Sbjct: 202 RILAVI-DVSSLFVYKVDQIEGNLLCNLVLKVEDPIANYVPEYDMVSWCPYV 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,705,980
Number of Sequences: 53049
Number of extensions: 573423
Number of successful extensions: 1050
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6662005335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)