Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G09
         (1197 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.49 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   1.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 736 FFLSFRQVIPIHFFLYRFLLISYCIE*LYYTF 641
           +F S   +  IH   Y  L+I  CI   YY F
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLCIYYFYYAF 245


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 350 GWADSISKILGSSKPKNKKTLVLSXAKKHSEI 445
           GW  ++ +I+ +   ++  T+    AKKH EI
Sbjct: 594 GWTANMERIMKAQALRDTSTMGYMAAKKHLEI 625


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 942 FHSSTDSLSQSFILAPIIKSSLKAFHLGLS 853
           F S T + S  FI+ P+I +S+  F +GL+
Sbjct: 491 FISKTLAESPIFIIIPVILTSVCYFMIGLN 520


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
 Frame = +2

Query: 497  NEIESKVKKEEINVEPPAKKVKHEKP------SIRIKPNVLEKDRERLLNKIATKGVVQL 658
            N +  K+K  E +VEP      H KP      +++I P V +   E+LL     +   + 
Sbjct: 1410 NSLTFKLKPHESDVEPIHGYTIHYKPEFGDWETVQIGPTVEKYTLEKLLCGTRYQVYAKA 1469

Query: 659  FNAV 670
            +N++
Sbjct: 1470 YNSI 1473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,505
Number of Sequences: 336
Number of extensions: 3275
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34835979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)