Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G07
         (1184 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111413-1|AAI11414.1|  393|Homo sapiens MESP2 protein protein.        32   3.5  
AL135927-26|CAI15545.1|  363|Homo sapiens progestin and adipoQ r...    32   3.5  
AK097404-1|BAC05037.1|  416|Homo sapiens protein ( Homo sapiens ...    31   6.2  

>BC111413-1|AAI11414.1|  393|Homo sapiens MESP2 protein protein.
          Length = 393

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -1

Query: 146 WTPPAVAPGPRDPSHMLGRSRCTRXPWHSPAALPECRKXKGIPYRS 9
           W  P+  PG +     LGR      PW +P   P C K +  PY S
Sbjct: 216 WGSPSACPGAQAAPERLGRGVHDTDPWATP---PYCPKIQSPPYSS 258


>AL135927-26|CAI15545.1|  363|Homo sapiens progestin and adipoQ
           receptor family member VI protein.
          Length = 363

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -2

Query: 148 AGRRRPSHRAHATPATCWGGRVARGXPGTVPLRCPSAESXKEFPIGAI 5
           AGR RP  RA A  A   GG   R  P  +P+  P A      P GA+
Sbjct: 95  AGRDRPGPRAAAAVAGVRGGLSTR-PPQVLPVAAPGAGGRPRLPCGAV 141


>AK097404-1|BAC05037.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40085 fis, clone TESTI2002993. ).
          Length = 416

 Score = 31.5 bits (68), Expect = 6.2
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 155 RRRWTPPAVAPGPRDPSHMLGRSRCT-RXPWHSPAALPEC 39
           R R++ PA +PGP  P   L R  CT R     PA  P C
Sbjct: 11  RPRFSLPAASPGPEPPQVGLSRPTCTLRASSPGPALPPGC 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,381,698
Number of Sequences: 237096
Number of extensions: 2083601
Number of successful extensions: 8276
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8272
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16623961460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)