Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G03
         (1228 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   6.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 15/56 (26%), Positives = 19/56 (33%)
 Frame = +2

Query: 794 PXPPXXGXPXPPXXLKERGXXXKTPXXXFPXPXXPXXXKXGXXFPXPPXKPPPXXP 961
           P  P  G P  P  ++  G            P  P   + G  +P PP  P P  P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGT---PTQPQPPRPGGMYPQPPGVPMPMRP 230



 Score = 26.2 bits (55), Expect = 2.0
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
 Frame = +3

Query: 774 PXGGXXPXXXPXXGTPAPXXPLRKGGXXXKPPXXGSQXR-XXPXXXXPG 917
           P G   P   P  GTP    P R GG   +PP      R   P    PG
Sbjct: 194 PPGNVGP---PRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPG 239


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 451 SPREXGGGXXGPXPXXGGGG 510
           +P   GG   GP P  GGGG
Sbjct: 211 APGGGGGSSGGPGPGGGGGG 230



 Score = 24.2 bits (50), Expect = 7.9
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
 Frame = +1

Query: 454 PREXGGGXXGPXPXXGG---GGPAP 519
           P   GGG  G  P  GG   GGP P
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGP 224


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
 Frame = -3

Query: 932 GXEXXPRXXXXXGXPXLGTXXGGFXXGPPFP*GXXGGXGXXXGXGXGXXTPXGGLPG--G 759
           G +  P      G P L         GP  P G  G  G     G        GLPG  G
Sbjct: 559 GRDGPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQG 618

Query: 758 XXAXXGPXG 732
                GP G
Sbjct: 619 QRGLPGPQG 627



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
 Frame = +3

Query: 546 PPPXXGEXGXPPXP----XGPRG--GXXSPRGXKG 632
           PP   GE G P  P     GP G  G   P+G KG
Sbjct: 563 PPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKG 597


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
 Frame = +2

Query: 776 PXGXXSPXPPXXGX-PXPPXXLKERGXXXKTPXXXFPXPXXPXXXKXGXXFPXPPXKPPP 952
           P G   P PP       PP  L       + P      P  P   +    FP  P   PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFF----PLNPAQLRFPAGFPNLPNAQPP 582

Query: 953 XXPXP 967
             P P
Sbjct: 583 PAPPP 587


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.151    0.526 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,111
Number of Sequences: 2352
Number of extensions: 12980
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139791474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)