Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_G02
         (1181 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.84 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   1.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   1.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   2.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.4 bits (53), Expect = 0.84
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 833 LRIIRDLSVFTPHNFTSLRDKTQLRNINFNHCTLSYD 723
           LR+IRDLS++    ++ LR K  +R+  +    L+Y+
Sbjct: 13  LRLIRDLSLYFSVIYSLLRVKRMMRSWYYLLTNLTYN 49


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 24/96 (25%), Positives = 48/96 (50%)
 Frame = +3

Query: 654 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPE 833
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+  K +      +  NP 
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR--KEIDIFLVAIQMNPP 346

Query: 834 NDGCINAVLLV*FIVESRENQDASITSLEIVIIIHL 941
                  V L  + V +RE   AS+ ++ I +I+ L
Sbjct: 347 K------VSLKGYTVVNRELVTASVATIAIYLIVLL 376


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 24/96 (25%), Positives = 48/96 (50%)
 Frame = +3

Query: 654 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPE 833
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+  K +      +  NP 
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR--KEIDIFLVAIQMNPP 346

Query: 834 NDGCINAVLLV*FIVESRENQDASITSLEIVIIIHL 941
                  V L  + V +RE   AS+ ++ I +I+ L
Sbjct: 347 K------VSLKGYTVVNRELVTASVATIAIYLIVLL 376


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 24/96 (25%), Positives = 48/96 (50%)
 Frame = +3

Query: 654 ATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPE 833
           +T+CL ++ V  + S Q   ++    + T+++VN+S++   T+  K +      +  NP 
Sbjct: 289 STYCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR--KEIDIFLVAIQMNPP 346

Query: 834 NDGCINAVLLV*FIVESRENQDASITSLEIVIIIHL 941
                  V L  + V +RE   AS+ ++ I +I+ L
Sbjct: 347 K------VSLKGYTVVNRELVTASVATIAIYLIVLL 376


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = +3

Query: 216 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKHNTEKVAEGALPVYLLDRDVQSRAKVLS 395
           RG K  +  KE + E ++ + KIK    + VK +++ +     P+ L+    + R K LS
Sbjct: 175 RGTKIVLHMKEDQTEFLE-EHKIK----EIVKKHSQFIG---YPIKLVVE--KEREKELS 224

Query: 396 N-MIKQKRKEKAGK-WDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTK 542
           +   ++++KE+ G+  D   PK+    + E     K  K K+K  K   T+
Sbjct: 225 DDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,683
Number of Sequences: 336
Number of extensions: 4160
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34537495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)