Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_G01
(1151 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical pr... 115 6e-26
AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical ... 115 6e-26
Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical pr... 38 0.013
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 1.5
Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 29 4.7
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 29 4.7
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 29 4.7
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 29 4.7
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 29 4.7
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 8.2
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 8.2
U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical p... 29 8.2
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 8.2
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 8.2
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 8.2
>Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 115 bits (277), Expect = 6e-26
Identities = 58/170 (34%), Positives = 101/170 (59%)
Frame = +3
Query: 207 RCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDR 386
+CE+C + + E + + + KVH+ + + +Q+ + E +C+
Sbjct: 29 KCEICALTSMEFEAK---SVKVHKQTRLKFLFIWF-----FLFQRLSSEFADITENICNG 80
Query: 387 ILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQC 566
E+ IHKE++ RF++ S+T +TL + +KGVKV+LG+P E+WD+PSAEI ++ C
Sbjct: 81 FNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIFALRQGC 140
Query: 567 ESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEK 716
ESLLE+ E +E+W+ N EDL LC ++ALK + SC ++ L++++
Sbjct: 141 ESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC-FDHLDHKQ 189
>AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 115 bits (277), Expect = 6e-26
Identities = 58/170 (34%), Positives = 101/170 (59%)
Frame = +3
Query: 207 RCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDR 386
+CE+C + + E + + + KVH+ + + +Q+ + E +C+
Sbjct: 29 KCEICALTSMEFEAK---SVKVHKQTRLKFLFIWF-----FLFQRLSSEFADITENICNG 80
Query: 387 ILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQC 566
E+ IHKE++ RF++ S+T +TL + +KGVKV+LG+P E+WD+PSAEI ++ C
Sbjct: 81 FNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIFALRQGC 140
Query: 567 ESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCLYEELNNEK 716
ESLLE+ E +E+W+ N EDL LC ++ALK + SC ++ L++++
Sbjct: 141 ESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC-FDHLDHKQ 189
>Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical
protein F09E8.2b protein.
Length = 310
Score = 37.9 bits (84), Expect = 0.013
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYQKSE 347
S+++V +K +C C L + L++T + H ++ D ++K KY+ SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 348 LRLIESLEGVCDR 386
RLIE LEGVC +
Sbjct: 69 TRLIEVLEGVCKK 81
>Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical
protein F09E8.2a protein.
Length = 356
Score = 37.9 bits (84), Expect = 0.013
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYQKSE 347
S+++V +K +C C L + L++T + H ++ D ++K KY+ SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 348 LRLIESLEGVCDR 386
RLIE LEGVC +
Sbjct: 69 TRLIEVLEGVCKK 81
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.1 bits (67), Expect = 1.5
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 156 DDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKT 329
D N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K
Sbjct: 4093 DGNAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDI 4149
Query: 330 KYQKSELR-LIESLE 371
K K++ + L+++LE
Sbjct: 4150 KDSKTKAKELLQALE 4164
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 162 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 335
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 3192 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 3248
Query: 336 QKSELR-LIESLE 371
K++ + L+++LE
Sbjct: 3249 SKTKAKELLQALE 3261
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 162 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 335
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 5049 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 5105
Query: 336 QKSELR-LIESLE 371
K++ + L+++LE
Sbjct: 5106 SKTKAKELLQALE 5118
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 162 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 335
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 5952 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 6008
Query: 336 QKSELR-LIESLE 371
K++ + L+++LE
Sbjct: 6009 SKTKAKELLQALE 6021
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 162 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 335
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 6855 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 6911
Query: 336 QKSELR-LIESLE 371
K++ + L+++LE
Sbjct: 6912 SKTKAKELLQALE 6924
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 162 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 335
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 7758 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 7814
Query: 336 QKSELR-LIESLE 371
K++ + L+++LE
Sbjct: 7815 SKTKAKELLQALE 7827
>Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical
protein F53B7.2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 959 SSLIT*LCNKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDT 816
S L+ +CN F +I+ S+ ++ ++ YYP L+F Y + L T
Sbjct: 126 SDLVLLVCN---FFMLIFPVIASMSNSYLLHDYYPVFLWFAYPVGLST 170
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTK 332
R++N ++ D V YA+ K EL+++LEE + I+ L +++ K K K
Sbjct: 277 REENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELREKLKEK 335
Query: 333 YQK 341
+K
Sbjct: 336 VEK 338
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTK 332
R++N ++ D V YA+ K EL+++LEE + I+ L +++ K K K
Sbjct: 311 REENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELREKLKEK 369
Query: 333 YQK 341
+K
Sbjct: 370 VEK 372
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTK 332
R++N ++ D V YA+ K EL+++LEE + I+ L +++ K K K
Sbjct: 408 REENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELREKLKEK 466
Query: 333 YQK 341
+K
Sbjct: 467 VEK 469
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTK 332
R++N ++ D V YA+ K EL+++LEE + I+ L +++ K K K
Sbjct: 471 REENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELREKLKEK 529
Query: 333 YQK 341
+K
Sbjct: 530 VEK 532
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 507 FRDPLLHLYLRDREGS*MFDSFLWQILYYR--TFLCEYCILIFYR 379
F P ++ L + F+SFLW +LY + F+C +L ++
Sbjct: 168 FDKPFINFILVPATSALQFNSFLWYMLYLKITNFICNLILLFIHK 212
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +3
Query: 228 LATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIES-LEGVCDRILEYNI 404
+A L+NR + GK++EV++I D KT +S+ +I S +EG+ + NI
Sbjct: 74 IANCLKNRSFKLGKINEVLKILLDFDSF----KTPETESQSNMIGSYMEGLSKILKRLNI 129
Query: 405 H-----KERSDSTRFAKGMSQT 455
K SD TR+ +Q+
Sbjct: 130 ARDDSLKSLSDETRYLNRFNQS 151
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 432 FAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEENE 590
F S KT+HGL+ +K+ + + +L+D+ S + Q ++L EE E
Sbjct: 400 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEKTLNEEKE 452
>Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical
protein C13G3.3a protein.
Length = 557
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 432 FAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEENE 590
F S KT+HGL+ +K+ + + +L+D+ S + Q ++L EE E
Sbjct: 396 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEKTLNEEKE 448
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 329
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 330 KYQKSELRLIE 362
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 329
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 330 KYQKSELRLIE 362
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
>Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical
protein D2045.9 protein.
Length = 534
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 243 QNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRI 389
Q RL K+ +++ I YSL + +K EL+ + LEG D I
Sbjct: 301 QERLNRMQKIFDILGIEYSLLEATDGQKLDELPEELKNYQILEGYLDPI 349
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 177 EEDVGVKYANRCEVCKILATELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYQKSE 347
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 289 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 348
Query: 348 L 350
L
Sbjct: 349 L 349
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 177 EEDVGVKYANRCEVCKILATELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYQKSE 347
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 291 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 350
Query: 348 L 350
L
Sbjct: 351 L 351
>U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical
protein B0361.2a protein.
Length = 460
Score = 28.7 bits (61), Expect = 8.2
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +3
Query: 222 KILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYN 401
KIL E++ + K+ +E G S DD PK K+K + + +R EG IL +
Sbjct: 84 KILKAEMKGDTDLVKKLKRKLESGISGDDEPPKSKSK-EVTMMR--RDREG---NILPAS 137
Query: 402 IHKERSDSTRFAKGMSQ 452
RSDS R +G S+
Sbjct: 138 --SRRSDSDRHGEGSSR 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 177 EEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYQKSEL 350
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 351 RLIESLEG 374
E LEG
Sbjct: 895 WDEEELEG 902
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 177 EEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYQKSEL 350
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 351 RLIESLEG 374
E LEG
Sbjct: 895 WDEEELEG 902
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 153 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 329
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 330 KYQKSELRLIE 362
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,718,023
Number of Sequences: 27780
Number of extensions: 372867
Number of successful extensions: 1063
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3130337400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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