Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F24
         (1163 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.47 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   5.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.47
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 630 FFFCLNRLRVRIIDDFPFMIITIHV*ALCCYIF 532
           F  C     V ++   PF+I T+H   LC Y F
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHF-LLCTYYF 103



 Score = 24.2 bits (50), Expect = 1.9
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = -3

Query: 789 HNILCQ*HGNIIFEILLNTSDLLSILNIF-INVSY--CAACFLLN*FALRPCYYFS---F 628
           H +LC  +    F ILL          IF +++ +  C   F++  F L   YYF     
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI 154

Query: 627 FFCLNRLRVRIIDDF--PFMIITIHV*ALCCYIF 532
            F ++ L +  I  F   F+I T+H+   C +IF
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 331 SPISHLSAFFLSHQFSNVSVLLCGLVVHYSIVLDVKAFREEQ 206
           SPI H  +  ++   S   +L   L+V+Y++ L    F+E Q
Sbjct: 154 SPIDHTESNIINDMCSLYYILQITLIVNYALALK-NRFKELQ 194


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -2

Query: 364 FVRTARSIDEISPISHLSAFFLSHQFSNVSVLLCGLVVHYSIVLDVKAFREEQ 206
           +V  A SID    I+H   F  S + + V V+L  L+     +  V  F E+Q
Sbjct: 135 YVLVALSIDRYDAITHPMNFSGSWKRARVLVMLAWLLSILFSLPTVFLFEEKQ 187


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 808 CIVSDTSQYIVSMTWQ 761
           C++SD     +S TWQ
Sbjct: 259 CVLSDHGTQFISNTWQ 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,034
Number of Sequences: 336
Number of extensions: 5033
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33918913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)