Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F24
         (1163 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open readi...    54   7e-07
AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.              54   7e-07
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi...    34   1.1  
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr...    34   1.1  
AL713895-3|CAI10950.1|  759|Homo sapiens novel protein protein.        34   1.1  
AL607128-2|CAI14188.1|  759|Homo sapiens novel protein protein.        34   1.1  
AK027280-1|BAB55015.1|  427|Homo sapiens protein ( Homo sapiens ...    34   1.1  

>BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open reading
           frame 49 protein.
          Length = 232

 Score = 54.4 bits (125), Expect = 7e-07
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = +1

Query: 187 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 366
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ +D L DL+ Q+ +P  QR
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 367 KYRDSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPP 495
               +  GK++ + R    E     N+ K  R +TV+ ++  P
Sbjct: 64  DLPKNRWGKMMEKKR----EQHEIKNETK--RSSTVDGLRKRP 100


>AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.
          Length = 232

 Score = 54.4 bits (125), Expect = 7e-07
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = +1

Query: 187 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 366
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ +D L DL+ Q+ +P  QR
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 367 KYRDSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPP 495
               +  GK++ + R    E     N+ K  R +TV+ ++  P
Sbjct: 64  DLPKNRWGKMMEKKR----EQHEIKNETK--RSSTVDGLRKRP 100


>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing
           1 C splice variant protein.
          Length = 2358

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +1

Query: 430 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 609
           SR  N   + +H   +R KP  D    +MKR++ +NV+      +S N  ++II++ + +
Sbjct: 154 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 213

Query: 610 PIQAKKERK 636
             + + + K
Sbjct: 214 KPENELKNK 222


>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
           protein.
          Length = 2210

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +1

Query: 430 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 609
           SR  N   + +H   +R KP  D    +MKR++ +NV+      +S N  ++II++ + +
Sbjct: 117 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 176

Query: 610 PIQAKKERK 636
             + + + K
Sbjct: 177 KPENELKNK 185


>AL713895-3|CAI10950.1|  759|Homo sapiens novel protein protein.
          Length = 759

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +1

Query: 430 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 609
           SR  N   + +H   +R KP  D    +MKR++ +NV+      +S N  ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395

Query: 610 PIQAKKERK 636
             + + + K
Sbjct: 396 KPENELKNK 404


>AL607128-2|CAI14188.1|  759|Homo sapiens novel protein protein.
          Length = 759

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +1

Query: 430 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 609
           SR  N   + +H   +R KP  D    +MKR++ +NV+      +S N  ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395

Query: 610 PIQAKKERK 636
             + + + K
Sbjct: 396 KPENELKNK 404


>AK027280-1|BAB55015.1|  427|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14374 fis, clone HEMBA1001635, weakly similar to
           TESTIS SPECIFIC PROTEIN A. ).
          Length = 427

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +1

Query: 430 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 609
           SR  N   + +H   +R KP  D    +MKR++ +NV+      +S N  ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395

Query: 610 PIQAKKERK 636
             + + + K
Sbjct: 396 KPENELKNK 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,207,598
Number of Sequences: 237096
Number of extensions: 2596126
Number of successful extensions: 5185
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5185
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16238637850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)