Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F24
         (1163 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY840220-1|AAV90635.1|  649|Drosophila melanogaster Tef protein.       31   3.0  
AY840219-1|AAV90634.1|  571|Drosophila melanogaster truncated Te...    31   3.0  
AY840216-1|AAV90631.1|  631|Drosophila melanogaster truncated Te...    31   3.0  
AY051818-1|AAK93242.1|  649|Drosophila melanogaster LD32631p pro...    31   3.0  
AE013599-2410|AAF57911.1|  649|Drosophila melanogaster CG8961-PA...    31   3.0  
AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p pro...    29   9.2  
AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA...    29   9.2  

>AY840220-1|AAV90635.1|  649|Drosophila melanogaster Tef protein.
          Length = 649

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1010 LFNCIPMAXPVLTNHRXHTITXMSPDLIETF-LSASQENKT 891
            L NC+P   P+LT+ + HT   +S ++ ET+ L+ASQ  KT
Sbjct: 278  LLNCVPK--PILTSQQAHTNAEIS-EINETYHLAASQVTKT 315


>AY840219-1|AAV90634.1|  571|Drosophila melanogaster truncated Tef
            protein.
          Length = 571

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1010 LFNCIPMAXPVLTNHRXHTITXMSPDLIETF-LSASQENKT 891
            L NC+P   P+LT+ + HT   +S ++ ET+ L+ASQ  KT
Sbjct: 278  LLNCVPK--PILTSQQAHTNAEIS-EINETYHLAASQVTKT 315


>AY840216-1|AAV90631.1|  631|Drosophila melanogaster truncated Tef
            protein.
          Length = 631

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1010 LFNCIPMAXPVLTNHRXHTITXMSPDLIETF-LSASQENKT 891
            L NC+P   P+LT+ + HT   +S ++ ET+ L+ASQ  KT
Sbjct: 278  LLNCVPK--PILTSQQAHTNAEIS-EINETYHLAASQVTKT 315


>AY051818-1|AAK93242.1|  649|Drosophila melanogaster LD32631p protein.
          Length = 649

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1010 LFNCIPMAXPVLTNHRXHTITXMSPDLIETF-LSASQENKT 891
            L NC+P   P+LT+ + HT   +S ++ ET+ L+ASQ  KT
Sbjct: 278  LLNCVPK--PILTSQQAHTNAEIS-EINETYHLAASQVTKT 315


>AE013599-2410|AAF57911.1|  649|Drosophila melanogaster CG8961-PA
            protein.
          Length = 649

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 1010 LFNCIPMAXPVLTNHRXHTITXMSPDLIETF-LSASQENKT 891
            L NC+P   P+LT+ + HT   +S ++ ET+ L+ASQ  KT
Sbjct: 278  LLNCVPK--PILTSQQAHTNAEIS-EINETYHLAASQVTKT 315


>AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p
           protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 397 IFYLFQNPGIF---FVRTARSIDEISPISHLSAFFLSHQFSNV 278
           I YL  N G+F   + RT   ++    +SHLS F+L+ Q   +
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETL 245


>AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA
           protein.
          Length = 409

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 397 IFYLFQNPGIF---FVRTARSIDEISPISHLSAFFLSHQFSNV 278
           I YL  N G+F   + RT   ++    +SHLS F+L+ Q   +
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETL 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,729,685
Number of Sequences: 53049
Number of extensions: 826617
Number of successful extensions: 2065
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6148272354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)