Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F24
         (1163 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    32   0.67 
Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    29   8.3  
AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchang...    29   8.3  

>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 0.67
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 733 SIQQDLKNNIAMSLTQYIVMYQKLCNFFVLSL 828
           ++  DL N   + LT Y+V Y+  C+FF++ L
Sbjct: 412 NLNNDLHNRATLGLTTYLVSYRFPCSFFLIEL 443


>Z73905-4|CAI91175.1|  536|Caenorhabditis elegans Hypothetical
           protein C32C4.7 protein.
          Length = 536

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +2

Query: 803 YAISLFSVYLMMMKFIHIIYYFKFNFIRLV--FYFPVMLIRKSQLNLET 943
           +++++  ++L +  F+ I+ YF F F+RL+         + KSQ N +T
Sbjct: 487 FSLNMIDIFLFLGVFLAILVYFLFTFLRLLLNLLLKKKAVEKSQENRKT 535


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 232 PELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQRKYRDSGRGKIL 399
           PE    E LT I +   ++ + +EK + DDL     QY   +   K +   RG+ L
Sbjct: 83  PEWPDREHLTAIFDNLDIQTNELEKTVCDDLPQTVTQYVNQFPDLKKKIEKRGRKL 138


>AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchangers
           protein 9 protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 541 TTKCSHMNSNNHKRKIINDPNSEPIQAKKERKVIT 645
           TT  ++ ++ N KR I+N   SEP     ERK+ T
Sbjct: 277 TTNNNNNDNKNEKRGIVNLGFSEPYSIPSERKIST 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,953,234
Number of Sequences: 27780
Number of extensions: 447251
Number of successful extensions: 1137
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)