Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F24
(1163 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 27 0.42
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 27 0.42
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 27 0.42
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 27 0.42
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 27 0.42
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 24 2.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 6.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 9.0
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 9.0
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 26.6 bits (56), Expect = 0.42
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 391 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 570
K +R+R + ++ N ++ R T+ ER + + +I + +++ K H N+N
Sbjct: 37 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95
Query: 571 NHKR 582
N+K+
Sbjct: 96 NYKK 99
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 26.6 bits (56), Expect = 0.42
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 391 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 570
K +R+R + ++ N ++ R T+ ER + + +I + +++ K H N+N
Sbjct: 37 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95
Query: 571 NHKR 582
N+K+
Sbjct: 96 NYKK 99
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 26.6 bits (56), Expect = 0.42
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 391 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 570
K +R+R + ++ N ++ R T+ ER + + +I + +++ K H N+N
Sbjct: 37 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95
Query: 571 NHKR 582
N+K+
Sbjct: 96 NYKK 99
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 26.6 bits (56), Expect = 0.42
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 391 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 570
K +R+R + ++ N ++ R T+ ER + + +I + +++ K H N+N
Sbjct: 37 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 95
Query: 571 NHKR 582
N+K+
Sbjct: 96 NYKK 99
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 26.6 bits (56), Expect = 0.42
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 391 KILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSN 570
K +R+R + ++ N ++ R T+ ER + + +I + +++ K H N+N
Sbjct: 270 KRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKI-ISSLSNKTIHNNNN 328
Query: 571 NHKR 582
N+K+
Sbjct: 329 NYKK 332
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 23.8 bits (49), Expect = 2.9
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +3
Query: 765 HVIDTIYCDVSETMQFLCSQS 827
+VI+ +CD+S ++ LC+ +
Sbjct: 52 NVINPFFCDMSPSLSLLCADT 72
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.6 bits (46), Expect = 6.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 115 LMRRRSKTSNHLSFNVA 165
L+R RS+ NHL NVA
Sbjct: 427 LLRNRSEYLNHLRANVA 443
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 9.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 143 FEVLERRRIR*FTGSXQKIEFEIPAHTNTMRYTRXSX*RXALVG 12
F V E + + G+ E+EIPAH TR A VG
Sbjct: 421 FHVQETDKYDAYYGNRFSGEYEIPAHGLPPSATRYDLGAVATVG 464
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 9.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 321 VISQHFFYPINSQMSLFY 268
V+ Q+FFY I + + FY
Sbjct: 195 VVCQNFFYQIYATLGSFY 212
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,962
Number of Sequences: 438
Number of extensions: 5653
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39524328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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