Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F22
         (1179 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   7.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 439 KWQEVKDRQKRPTVNVEVAKRLVRNGL 519
           KW    D  + PTV  EV +  +  G+
Sbjct: 31  KWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 439 KWQEVKDRQKRPTVNVEVAKRLVRNGL 519
           KW    D  + PTV  EV +  +  G+
Sbjct: 31  KWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 356 GYIYEQKASIPQN 394
           GYIY+ +  +PQN
Sbjct: 263 GYIYDDEMVVPQN 275


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 356 GYIYEQKASIPQN 394
           GYIY+ +  +PQN
Sbjct: 88  GYIYDDEMVVPQN 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,775
Number of Sequences: 336
Number of extensions: 3958
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34434398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)