Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F21
(1190 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0701 - 35620559-35620777,35620872-35620949,35621038-356211... 205 6e-53
02_04_0525 - 23672984-23673085,23673315-23673419,23673820-236739... 32 1.0
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 31 1.3
06_01_0248 - 1871955-1872199,1872289-1872447,1873139-1873237,187... 31 1.8
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 30 4.1
07_01_0459 - 3478756-3478923,3479027-3479092,3479200-3479280,347... 29 5.4
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 29 7.2
07_03_0379 - 17452525-17452695,17452990-17453325,17453419-174536... 29 7.2
12_01_0143 + 1096622-1096882,1096951-1097264,1097361-1097382 29 9.5
>03_06_0701 -
35620559-35620777,35620872-35620949,35621038-35621191,
35621279-35621391,35621487-35621586,35622193-35622389,
35622470-35622526,35622630-35622734,35622824-35622931,
35623651-35623848,35624022-35624024
Length = 443
Score = 205 bits (500), Expect = 6e-53
Identities = 106/234 (45%), Positives = 151/234 (64%), Gaps = 23/234 (9%)
Frame = +1
Query: 313 IQEAIDQLLALEKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQ 492
+ AI+ LL +EKQ R D+ T + + +V++ ++A W LND IVVLSKRR QLKQ
Sbjct: 8 LDAAIESLLNVEKQMRLAGDVAGTRKAAIDIVELCYKAGAWKTLNDQIVVLSKRRGQLKQ 67
Query: 493 AVVKMVQECYTYVDKTPDKETKIKLIETLRTITEGKIYVEVERARLTHILAKIREEEGNV 672
A+ MVQ+ Y+D TPD +T+I+LI+TL +++ GKIYVE+ERARL LAKI+EE+G +
Sbjct: 68 AITAMVQKAMEYIDLTPDMDTRIELIKTLSSVSAGKIYVEIERARLIKRLAKIKEEQGQI 127
Query: 673 AEAAKIIQELQVETYGSMDKREKVELILEQMRLCLAIKDYVRTQIISKKINTKFFEDENT 852
EAA ++QE+ VET+GSM K EK+ ILEQ+RLCL +DYVR QI+S+KI+ + F+ + +
Sbjct: 128 DEAADLMQEVAVETFGSMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISPRVFDADPS 187
Query: 853 Q-----------------------ELKEKFYRLMIAVDQHNGQYLSVCRHXRAL 945
+ ELK +Y LMI HN YL +CR +++
Sbjct: 188 KEKKKPKEGDNIVQEAPAEIPSLLELKRIYYELMIRYYSHNNDYLEICRCYKSI 241
>02_04_0525 -
23672984-23673085,23673315-23673419,23673820-23673979,
23674085-23674162,23674383-23674524,23674641-23674785,
23674888-23674950,23675042-23675101,23675364-23675441,
23675524-23675598,23675744-23675860,23675960-23676190,
23676300-23676419,23676512-23676588,23676669-23676769,
23676844-23676950,23677094-23677251,23677383-23677599
Length = 711
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 700 LQVETYGSMDKREKVELILEQMRLCLAIKDYVRTQIISKKINTKFFEDENTQELKEKFYR 879
++++T + D ++ + + E MR+ D+VR + +K FE +NT L +K Y
Sbjct: 106 IRIQTMTTSDTKDVAKTVEEVMRIADKGADFVRITVQGRKEADACFEIKNT--LVQKNYN 163
Query: 880 LMIAVDQH 903
+ + D H
Sbjct: 164 IPLVADIH 171
>12_02_0792 -
23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 217 DASGKIIKMEVDYSATCDEKLPLW-----KSWAAQGKIQEAIDQLL-ALEKQTRTGADMV 378
+ + + K+EVD S + W K + Q K A ++ A EK+TR
Sbjct: 500 EKTAPVEKVEVDLSLSAHANARRWYELKKKQESKQEKTVTAHEKAFKAAEKKTRLQLAQE 559
Query: 379 STSRILVTVVQIY-FEAKNWSALNDHIVVLSKRRSQLKQAVVK 504
T + + +++ FE NW +++ +++S R +Q + +VK
Sbjct: 560 KTVAAITHMRKVHWFEKFNWFISSENYLIISGRDAQQNELIVK 602
>06_01_0248 -
1871955-1872199,1872289-1872447,1873139-1873237,
1873420-1873589,1874420-1874868
Length = 373
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 805 IISKKINTKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVCRHXRALGTAG 957
+I K++ FEDEN QELK+ VD+ +G+ + ALG+ G
Sbjct: 276 VIRKRLMPLIFEDENGQELKQAVAPGSEVVDKESGKKIGTVN--TALGSRG 324
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 234 YFSTSIETADXSVCSHFEKLKFICLY---QNXILNSVNVTRHKIIACVLDFTN 85
YF+T +AD + K+IC+Y + +L +TR+ + VLDF N
Sbjct: 611 YFTTLCYSADGTYILAGGNSKYICMYDVGEQVLLRRFQITRNLSLDGVLDFLN 663
>07_01_0459 -
3478756-3478923,3479027-3479092,3479200-3479280,
3479402-3479479,3479625-3479711,3480127-3480223,
3480266-3480339,3480687-3480775,3480878-3480926,
3481090-3481146,3481256-3481357,3482365-3482382
Length = 321
Score = 29.5 bits (63), Expect = 5.4
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 346 EKQTRTGADMVSTSRILVTVVQIYFEAKNWSALNDHIVVLSKRRSQLKQAVVKMVQECYT 525
E+ T M S S ++ + K ++D V+ R + + V + V +T
Sbjct: 126 EQTTGVHKAMNSCSSTMLAKFYRAVKKKLKERMDDFQVLREAIRQEYRDVVERRV---FT 182
Query: 526 YVDKTPDKETKIKLIETLRTITEGKIYVEVE-RARLTHILAKIREEEGNVAEAAKIIQEL 702
PD+ET LIET R+ + ++ + R ++ +A+I+E V + + + EL
Sbjct: 183 VTGSRPDEETVDNLIETGRSEQIFQEAIQQQGRGQILDTVAEIQERHDAVRDLERKLLEL 242
Query: 703 Q 705
Q
Sbjct: 243 Q 243
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = +1
Query: 604 YVEVERARLTHILAKIREEEGNVAEAAKIIQELQVETYGSMDKREKVELILEQMRLCLAI 783
Y+ VE L L ++ E+ N+ E ++ ++ E + K+E+ +LE+ +
Sbjct: 751 YLNVEENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREVRVLEKKINEIVD 810
Query: 784 KDYVRTQIISKKINTKFFEDENTQELKE 867
+ Y + SK + K + ++LK+
Sbjct: 811 RIY---KDFSKSVGVKNIREYEERQLKD 835
>07_03_0379 -
17452525-17452695,17452990-17453325,17453419-17453691,
17453784-17453858,17453951-17454105,17454198-17454314,
17454394-17454684,17454811-17454859
Length = 488
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 808 ISKKINTKFFEDENTQELKEKFYRLMIAVDQHNGQYLSVC 927
+ + +N K EDE + +KEK+ +L++ D +G VC
Sbjct: 101 LQQVVNEKSLEDEEMELMKEKYTKLLLGEDM-SGSGKGVC 139
>12_01_0143 + 1096622-1096882,1096951-1097264,1097361-1097382
Length = 198
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Frame = +1
Query: 280 PLWKSWAAQGKIQE-----AIDQLLALEK 351
P+WK + QGK QE A++QLL LEK
Sbjct: 91 PIWKWFTTQGKEQEDAYEAAMEQLLVLEK 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,586,657
Number of Sequences: 37544
Number of extensions: 448260
Number of successful extensions: 948
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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