Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F18
         (1193 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   2.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   2.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   6.0  

>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 658 RVFYYWDY*FLIITEISA*GCVF 590
           R+++YW + FLI+  +    C+F
Sbjct: 319 RIYFYWSFGFLIVRTVCL--CLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 658 RVFYYWDY*FLIITEISA*GCVF 590
           R+++YW + FLI+  +    C+F
Sbjct: 319 RIYFYWSFGFLIVRTVCL--CLF 339


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 658 RVFYYWDY*FLII 620
           R+++YW + FLII
Sbjct: 319 RIYFYWSFGFLII 331


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 920 VNLIISVATRMFFGHFVQFP 861
           +NLII V T++ +  F  FP
Sbjct: 681 MNLIIHVGTQLIYRPFSHFP 700


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,515
Number of Sequences: 336
Number of extensions: 3984
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34733218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)