Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F18
         (1193 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472...   174   1e-43
04_04_0940 - 29539138-29539626,29540125-29540531,29540631-295406...    30   3.1  

>11_04_0330 -
           16446685-16446776,16446968-16447119,16447172-16447281,
           16447518-16447619,16447705-16447854,16448195-16448350,
           16448552-16448713,16449549-16449638,16450152-16450271,
           16451323-16451418,16451502-16451638,16453400-16453622
          Length = 529

 Score =  174 bits (423), Expect = 1e-43
 Identities = 99/223 (44%), Positives = 123/223 (55%), Gaps = 14/223 (6%)
 Frame = +2

Query: 239 LIPELCNQFYHLGWVXXXXXXXXXXXXXXXXX--------APSGVQKERMIANDLFVQTI 394
           L+ ELC  FY  GWV                         +PSGVQKERM+A D++V + 
Sbjct: 32  LVAELCRHFYGQGWVTGTGGSITVKANDPALPLADQLIVMSPSGVQKERMVAEDMYVLSA 91

Query: 395 D----DXXXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLYD--KVF 556
           D                   + C PLFM AY MR AGAVIH+H       T+L    K F
Sbjct: 92  DGKVLSSPVSKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSHGMETCIATMLDPGAKEF 151

Query: 557 EITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVR 736
            +TH EMIKGIK         Y ++LVVPIIENTP+E +L  SL EA+  YP  +AVLVR
Sbjct: 152 RMTHMEMIKGIKGHG------YRDELVVPIIENTPYEYELTDSLAEAIAAYPKATAVLVR 205

Query: 737 RHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPE 865
            HG+YVWGD+W  AKT  ECY YLF+ A+++ +LG+D T  PE
Sbjct: 206 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWT-TPE 247


>04_04_0940 -
           29539138-29539626,29540125-29540531,29540631-29540662,
           29540809-29541086,29541164-29542515,29542616-29542874
          Length = 938

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 650 ENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYVWGDTWQQAKTM 787
           ENT  +  L+    E LKE  G S  L+  +G+Y +   W  A  +
Sbjct: 286 ENTRRKSMLSSKWSELLKEDSGHSRFLLSTYGLYAYDTVWMLAHAL 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,327,128
Number of Sequences: 37544
Number of extensions: 388288
Number of successful extensions: 772
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3643211076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)