Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F18
         (1193 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49131-4|CAA88977.2|  263|Caenorhabditis elegans Hypothetical pr...   161   9e-40
Z77662-8|CAB01196.1|  206|Caenorhabditis elegans Hypothetical pr...    29   6.5  

>Z49131-4|CAA88977.2|  263|Caenorhabditis elegans Hypothetical
           protein ZC373.5 protein.
          Length = 263

 Score =  161 bits (391), Expect = 9e-40
 Identities = 87/223 (39%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
 Frame = +2

Query: 248 ELCNQFYHLGWVXXXXXXXXXXXXXXXXXAPSGVQKERMIANDLFVQTIDDXXXXXXXXX 427
           EL  QFY LGW+                 +PS +QKER+   D+FV  + D         
Sbjct: 35  ELMIQFYKLGWMRGSGGAMGCISGSELMISPSALQKERIREQDVFVYNMKDKTEVQRPPN 94

Query: 428 XXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCT-LLYDKVFEITHQEMIKGIKDTSL 604
                S C+ LF L  +   +  VIHTHS  A   T L+   VFEI+HQE IKGI D   
Sbjct: 95  KRITVSSCSVLFSLIMKETGSECVIHTHSKCANLITQLIKSNVFEISHQEYIKGIYDPFS 154

Query: 605 GRYLRYDEKLVVPIIENTPFEKDLAGSLEEALKEYPGTSAVLVRRHGVYVWGDTWQQAKT 784
           G+ L+Y + L +PII+N P E  L   +   L+ YP   AVLVR HG++VWG TW+  K 
Sbjct: 155 GKALKYSDTLTIPIIDNMPSESQLLEPIRGVLENYPQAIAVLVRNHGLFVWGPTWESTKI 214

Query: 785 MTECYDYLFEMAVEMKKLGLDPTFNPETAQNGQKTS*LLQKLL 913
           MTEC DYL E+++EM K  + P  N E  +     S  ++ L+
Sbjct: 215 MTECIDYLLELSIEMLKNNI-PLVNEEAFEKEDNLSDKMRTLM 256


>Z77662-8|CAB01196.1|  206|Caenorhabditis elegans Hypothetical
           protein F47B8.8 protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +2

Query: 692 EALKEYPGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETA 871
           +A +++  TS  L+  + VY+    +        C DY  ++  E+  L LD    P+  
Sbjct: 46  QASRDFQWTSIRLINFYAVYLECPIYASVL----CDDYNHDLESEILTLSLDTPLTPDNT 101

Query: 872 QNG 880
           QNG
Sbjct: 102 QNG 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,920,537
Number of Sequences: 27780
Number of extensions: 360630
Number of successful extensions: 786
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)