Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F17
(1234 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 46 7e-05
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 46 7e-05
Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical pr... 36 0.059
Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical pr... 36 0.059
Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.9
U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or aq... 29 5.1
U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or aq... 29 5.1
U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or aq... 29 5.1
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 29 6.8
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 8.9
>Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical
protein C32C4.2 protein.
Length = 244
Score = 52.4 bits (120), Expect = 6e-07
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 17/186 (9%)
Frame = +3
Query: 258 HTALASGCVVTMLVQGLDHISGAMMNPTVTLAAVVWGRVSAVRAI--VMFXXXXXXXXXX 431
H A A G + +L +SGA +NP VT + GR+S + A+ V+
Sbjct: 43 HAAFAHGVAIFVLAATFGGVSGAHINPAVTFGIALVGRISPIHAVCYVVSQLLGSVFGAL 102
Query: 432 XXXXXXXXXXXXXXXXCLTVPAPGVSTARAVAVEAVLGACLA--LVNCAAWDPRNQHLRD 605
T+ G + + E V L ++ CA +N+
Sbjct: 103 LVRISLPYKMYNVISAGATLCGKGYNWQEGLTAEIVTTYILVQTVLLCAVDTDKNRLA-- 160
Query: 606 SWPLRIGTSVAAMSLVAGTLTGAXMNPARXLXPXVLLGXF-------------HHXWVYX 746
PL IG S+ L AG ++GA MNPAR P ++ F ++ W+Y
Sbjct: 161 --PLAIGFSLIIEILAAGAISGASMNPARSFGPNIMGQVFLKPEHLDAQYMYWNYHWIYY 218
Query: 747 VGPXXG 764
+GP G
Sbjct: 219 IGPIIG 224
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 45.6 bits (103), Expect = 7e-05
Identities = 46/182 (25%), Positives = 70/182 (38%), Gaps = 13/182 (7%)
Frame = +3
Query: 258 HTALASGCVVTMLVQGLDHISGAMMNPTVTLAAVVWGRVSAVRAIVMFXXXXXXXXXXXX 437
H A A G + +LV HISG NP V+ A G++ + +
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFH-LPFYVVSQLLGGICGA 134
Query: 438 XXXXXXXXXXXXXXC---LTVPAPGVSTARAVAVEAVLGACLA-LVNCAAWDPRNQHLRD 605
C T+ +PG + + E V+ L + A D L
Sbjct: 135 FLTAAVLSQEQLTSCEAGATLLSPGSQWWQGLIAETVVTFFLVHTILITAADTDTVTLA- 193
Query: 606 SWPLRIGTSVAAMSLVAGTLTGAXMNPARXLXPXVLLGXF---------HHXWVYXVGPX 758
PL IG +++ L G++TGA MNPAR L P ++ F ++ ++Y GP
Sbjct: 194 --PLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYWAGPL 251
Query: 759 XG 764
G
Sbjct: 252 LG 253
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 45.6 bits (103), Expect = 7e-05
Identities = 46/182 (25%), Positives = 70/182 (38%), Gaps = 13/182 (7%)
Frame = +3
Query: 258 HTALASGCVVTMLVQGLDHISGAMMNPTVTLAAVVWGRVSAVRAIVMFXXXXXXXXXXXX 437
H A A G + +LV HISG NP V+ A G++ + +
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFH-LPFYVVSQLLGGICGA 134
Query: 438 XXXXXXXXXXXXXXC---LTVPAPGVSTARAVAVEAVLGACLA-LVNCAAWDPRNQHLRD 605
C T+ +PG + + E V+ L + A D L
Sbjct: 135 FLTAAVLSQEQLTSCEAGATLLSPGSQWWQGLIAETVVTFFLVHTILITAADTDTVTLA- 193
Query: 606 SWPLRIGTSVAAMSLVAGTLTGAXMNPARXLXPXVLLGXF---------HHXWVYXVGPX 758
PL IG +++ L G++TGA MNPAR L P ++ F ++ ++Y GP
Sbjct: 194 --PLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYWAGPL 251
Query: 759 XG 764
G
Sbjct: 252 LG 253
>Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical
protein C01G6.1b protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.059
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Frame = +3
Query: 492 PAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTLTG 671
PAP + + V A + D RN + P+ +GT A+ G G
Sbjct: 146 PAPHLGLVNGFVDQFVATAVFVFLIAHIVDKRNSYPTWLQPILVGTGFVAIGAAFGYNCG 205
Query: 672 AXMNPARXLXPXVLLGXFH-------HXWVYXVGPXXG 764
+NPAR P + F+ WV VGP G
Sbjct: 206 YPVNPARDFAPRLFTSIFYGGAVFTKWFWVPIVGPFVG 243
>Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical
protein C01G6.1a protein.
Length = 290
Score = 35.9 bits (79), Expect = 0.059
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Frame = +3
Query: 492 PAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTLTG 671
PAP + + V A + D RN + P+ +GT A+ G G
Sbjct: 146 PAPHLGLVNGFVDQFVATAVFVFLIAHIVDKRNSYPTWLQPILVGTGFVAIGAAFGYNCG 205
Query: 672 AXMNPARXLXPXVLLGXFH-------HXWVYXVGPXXG 764
+NPAR P + F+ WV VGP G
Sbjct: 206 YPVNPARDFAPRLFTSIFYGGAVFTKWFWVPIVGPFVG 243
>Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical
protein C35A5.1 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 243 PLSSTHTALASGCVVTMLVQGLDHISGAMMNPTVTLAAVV 362
P+ TH AL G +++ ISG NP V+ A V+
Sbjct: 46 PVGLTHAALTHGLATIVVIAVFGKISGGHFNPVVSWAMVL 85
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 588 NQHLRDSWPLRIGTSVAAMSLVAGTLTGAXMNPARXLXPXVL 713
N ++ P IG V ++TG MNP R L P ++
Sbjct: 201 NNEPSEATPFIIGMMVIVNIFATASITGTAMNPVRALSPNIV 242
>U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform b protein.
Length = 294
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 486 TVPAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTL 665
T P +S ++ + + A L+ + C D R+Q P+ G+ ++ +++ G
Sbjct: 145 TFPPDHMSVWGSLLDQIIGTAMLSGLVCLITDKRHQIPTGVVPVLAGSIMSMVAMTFGAN 204
Query: 666 TGAXMNPARXLXPXVLLGXFHHXW 737
G +NPAR P V + W
Sbjct: 205 GGFAINPARDFGPRVFCLCAGYGW 228
>U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform b protein.
Length = 295
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 492 PAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTLTG 671
P+P + + V LA C D RNQ + P+ G V + G G
Sbjct: 152 PSPNLGVWGPYIDQCVGTGVLAYFLCVVIDERNQIPKIWHPMFFGFLVMMIGTGFGMNIG 211
Query: 672 AXMNPARXLXP 704
+NPAR L P
Sbjct: 212 YPINPARDLGP 222
>U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform a protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 492 PAPGVSTARAVAVEAVLGACLALVNCAAWDPRNQHLRDSWPLRIGTSVAAMSLVAGTLTG 671
P+P + + V LA C D RNQ + P+ G V + G G
Sbjct: 161 PSPNLGVWGPYIDQCVGTGVLAYFLCVVIDERNQIPKIWHPMFFGFLVMMIGTGFGMNIG 220
Query: 672 AXMNPARXLXP 704
+NPAR L P
Sbjct: 221 YPINPARDLGP 231
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 29.1 bits (62), Expect = 6.8
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 486 TVPAPGVSTARAVAVEAVLGACLALVNCAA-WDPRNQHLRDSWPLRIGTSVAAMSLVAGT 662
T P P + T A+ V+ + G + + AA D RN P IG +A + +
Sbjct: 247 TYPGPFLGTFNAI-VDQIAGTLVLCLGVAAITDRRNGIPAFLQPAWIGALLAFLGMSLAL 305
Query: 663 LTGAXMNPARXLXP 704
G +NPAR P
Sbjct: 306 NAGYAINPARDFAP 319
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -2
Query: 753 GPXSTPXGDGXAPIRPRGXXXGPGSXWRPSACPQQGTWPPRTCRSGAAMSHAGVGCADP 577
GP P DG A P G PG+ P PPRT +GA A P
Sbjct: 265 GPPGPPGKDGEAG--PDGPAGAPGTDGAPGPDAAYCPCPPRTLGAGAYPEGGDAAAAAP 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,205,197
Number of Sequences: 27780
Number of extensions: 287219
Number of successful extensions: 1049
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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