Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F16
(1233 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 298 9e-82
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 298 9e-82
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 183 4e-47
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 108 2e-24
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 79 1e-15
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 69 1e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 68 3e-12
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 36 0.015
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 34 0.035
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 28 2.3
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 28 2.3
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 28 2.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 3.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 3.1
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 4.0
SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyce... 27 5.3
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 298 bits (732), Expect = 9e-82
Identities = 156/307 (50%), Positives = 198/307 (64%), Gaps = 5/307 (1%)
Frame = +3
Query: 165 NLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISM 344
N+RNMSV+AHVDHGKSTLTDSLV K RF DTR D Q R +TIKSTAIS+
Sbjct: 18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISL 77
Query: 345 FFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 521
F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 78 FAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTI 132
Query: 522 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 701
QTETVLRQA+ ERI+P++ +NK+DR YQ F R+VE+VNV+I+TY
Sbjct: 133 EGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTY 192
Query: 702 NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFF 881
D +G+ +V P KG+V F SGLHGWAFT++QF+ YA KF ID K+M RLWGEN+F
Sbjct: 193 YDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKKFGIDRNKMMQRLWGENYF 250
Query: 882 NPQT----XXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGVXIXHE 1049
NP+T R+F M++ DPIY++FDA+M K + LL K+ V I +
Sbjct: 251 NPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFTLLSKLEVTIKPD 310
Query: 1050 DSDKXGK 1070
+ + GK
Sbjct: 311 EKELEGK 317
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 298 bits (732), Expect = 9e-82
Identities = 156/307 (50%), Positives = 198/307 (64%), Gaps = 5/307 (1%)
Frame = +3
Query: 165 NLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISM 344
N+RNMSV+AHVDHGKSTLTDSLV K RF DTR D Q R +TIKSTAIS+
Sbjct: 18 NVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISL 77
Query: 345 FFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 521
F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 78 FAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTI 132
Query: 522 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 701
QTETVLRQA+ ERI+P++ +NK+DR YQ F R+VE+VNV+I+TY
Sbjct: 133 EGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTY 192
Query: 702 NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFF 881
D +G+ +V P KG+V F SGLHGWAFT++QF+ YA KF ID K+M RLWGEN+F
Sbjct: 193 YDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKKFGIDRNKMMQRLWGENYF 250
Query: 882 NPQT----XXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGVXIXHE 1049
NP+T R+F M++ DPIY++FDA+M K + LL K+ V I +
Sbjct: 251 NPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFTLLSKLEVTIKPD 310
Query: 1050 DSDKXGK 1070
+ + GK
Sbjct: 311 EKELEGK 317
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 183 bits (446), Expect = 4e-47
Identities = 115/313 (36%), Positives = 164/313 (52%), Gaps = 14/313 (4%)
Frame = +3
Query: 156 SQRNLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTA 335
+Q N+RN ++LAHVDHGK+TL DSL++ RF D R+D R IT+KS+A
Sbjct: 15 NQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSA 74
Query: 336 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 515
IS+FF++ I+ D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA
Sbjct: 75 ISLFFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVD 126
Query: 516 XXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 695
QT TVLRQA +RIK IL +NKMDR + R+VE VN +I
Sbjct: 127 AVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVIG 186
Query: 696 TY----------NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLV 845
T+ ND+ + P +G+V F S GWAF L QFSE Y K +
Sbjct: 187 TFYTGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSEFYEKKLGLKQK 246
Query: 846 KLMNRLWGENFFNPQTXXXXXXXXXXXXR---SFCMYVXDPIYKVFD-AIMKFXKXXIDD 1013
L LWG+ + +P+T R F +V + ++ V++ A+ I+
Sbjct: 247 ALTKCLWGDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYESAVSNRNLENIEK 306
Query: 1014 LLKKMGVXIXHED 1052
++K + + + D
Sbjct: 307 IIKALNIKVLPRD 319
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 108 bits (259), Expect = 2e-24
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Frame = +3
Query: 165 NLRNMSVLAHVDHGKSTLTDSLVS-KXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAIS 341
++R+ V H+ HGKS L D LV R+TDT + R ++IKST ++
Sbjct: 139 DVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLT 198
Query: 342 MFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 521
+ D + K+ F ID+PGHVDF EV A + ++DG +
Sbjct: 199 LAVS------------DMKGKT---FAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI 243
Query: 522 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 701
T +++ AI + +L +NK+DR Y + +++ VN I
Sbjct: 244 EGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQI 303
Query: 702 NDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKF-KIDLVKLMNRLWGENF 878
+ D + RV P G+V F S G+ FTL F+++Y D+ ID+ RLWG+ +
Sbjct: 304 SKD----LKYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDRHGGIDVDLFSKRLWGDIY 359
Query: 879 FNPQT-XXXXXXXXXXXXRSFCMYVXDPIYKV 971
F+ +T RSF ++ +P+YK+
Sbjct: 360 FDSKTRKFAKQSLDGSGVRSFVHFILEPLYKL 391
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 79.0 bits (186), Expect = 1e-15
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Frame = +3
Query: 162 RNLRNMSVLAHVDHGKSTLTDSLVS-----KXXXXXXXXXXXXRFTDTRKDXQXRCITIK 326
+ +RN+ + AH+D GK+T T+ ++ K D + + + ITI+
Sbjct: 57 KQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGITIQ 116
Query: 327 STAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALX 506
S A +E + N Q+ EK + IN+ID+PGH+DF+ EV ALRV DGA+
Sbjct: 117 SAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVL 174
Query: 507 XXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 611
QT TV RQ + I F+NKMDR
Sbjct: 175 VLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 68.9 bits (161), Expect = 1e-12
Identities = 48/167 (28%), Positives = 75/167 (44%)
Frame = +3
Query: 159 QRNLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAI 338
Q +RN +V+AH+DHGKSTL+D ++ K +F D + + R IT+K+
Sbjct: 55 QNRVRNWAVIAHIDHGKSTLSDCIL-KLTGVINEHNFRNQFLDKLEVERRRGITVKAQTC 113
Query: 339 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 518
SM + + +L+NLID+PGHVDF +EV +L +G +
Sbjct: 114 SMIYYYHGQS----------------YLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDA 157
Query: 519 XXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTF 659
QT + A ++ + I +NK+D QTF
Sbjct: 158 SQGIQAQTLSNFYMAFSQNLVIIPVLNKVDLPTADVDRTLIQVQQTF 204
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 67.7 bits (158), Expect = 3e-12
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 156 SQRNLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFT--DTRKDXQXRCITIKS 329
S ++RN+ ++AH+D GK+TLT+ ++ T D + R ITI S
Sbjct: 24 SINSIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINS 83
Query: 330 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 509
AIS + +QR INLID+PGH DF+ EV ++ V DGA+
Sbjct: 84 AAISFTWR------------NQR--------INLIDTPGHADFTFEVERSVAVLDGAVAI 123
Query: 510 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 611
QT+ V +QA I ++F+NKMDR
Sbjct: 124 IDGSAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 35.5 bits (78), Expect = 0.015
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 1/146 (0%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + HVDHGK+TLT ++ D + + R ITI S + +E
Sbjct: 55 NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVE--YE 112
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 533
+ +D PGH D+ + DGA+
Sbjct: 113 TANRHYAH------------------VDCPGHADYIKNMITGAATMDGAIIVVSATDGQM 154
Query: 534 XQTETVLRQAIAERIKPI-LFMNKMD 608
QT L A +K I +++NK+D
Sbjct: 155 PQTREHLLLARQVGVKQIVVYINKVD 180
>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 34.3 bits (75), Expect = 0.035
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 786 AFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNPQ 890
A+ + + E Y DK K ++K +W FFNP+
Sbjct: 153 AYVISYYVEKYVDKAKFPIIKGFIEMWNRKFFNPR 187
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSK 239
N+ V+ HVD GKST T L+ K
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYK 30
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSK 239
N+ V+ HVD GKST T L+ K
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYK 30
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSK 239
N+ V+ HVD GKST T L+ K
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYK 30
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -3
Query: 550 TVSVCTHTPD-TQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 374
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 373 TKSFSSSSKNIEMAV 329
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 377
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 376 NTKSFSSSSKNIEMAV 329
++ S SSSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 27.1 bits (57), Expect = 5.3
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 556 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 377
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 376 NTKSFSSSSKN 344
++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 177 MSVLAHVDHGKSTLTDS 227
++++ HVDHGK+TL D+
Sbjct: 174 VTLMGHVDHGKTTLLDA 190
>SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 393
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 795 LKQFSEMYADKFKIDLVKLMNRLWGENFFNPQT 893
L QF + +++ F +D+ ++ LW ++ +P T
Sbjct: 242 LFQFGDQFSEAFLLDVCSIITALWLKSVVDPNT 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,193,798
Number of Sequences: 5004
Number of extensions: 81310
Number of successful extensions: 243
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 669373152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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