Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F16
         (1233 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   2.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   6.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   6.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   7.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   7.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 436 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 323
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 323 NGDATXLXVLTRVSETGXSGXRTSND 246
           +GD T L  +T ++E+G     TS D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 323 NGDATXLXVLTRVSETGXSGXRTSND 246
           +GD T L  +T ++E+G     TS D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 592 NRIGLMRSAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSA 476
           N +GL RS  A  S  SV    P +   T RAP    +A
Sbjct: 3   NALGLTRSMSADTSKTSVGKQLPASGIPTLRAPMAAGNA 41


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 161 AESPQHVCARPRRSRQVNPHG 223
           A + QH+  RP+RS + NP G
Sbjct: 277 AGAQQHLSHRPQRSTRKNPAG 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,099,380
Number of Sequences: 2352
Number of extensions: 22465
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140608968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)