Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F16
(1233 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 375 e-104
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 372 e-103
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 138 7e-33
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 138 7e-33
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 131 1e-30
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 131 1e-30
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 67 3e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 65 1e-10
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 63 3e-10
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 35 0.10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 35 0.10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 35 0.10
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.31
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 32 0.73
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 32 0.96
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 32 0.96
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 2.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 2.2
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 30 3.9
AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical ... 30 3.9
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 30 3.9
Z82264-6|CAB05157.1| 214|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 6.8
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 29 8.9
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 8.9
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 8.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 375 bits (923), Expect = e-104
Identities = 190/312 (60%), Positives = 219/312 (70%), Gaps = 8/312 (2%)
Frame = +3
Query: 159 QRNLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAI 338
+RN+RNMSV+AHVDHGKSTLTDSLVSK RFTDTRKD Q RCITIKSTAI
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAI 75
Query: 339 SMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTAALRVTD 494
S+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEVTAALRVTD
Sbjct: 76 SLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTD 135
Query: 495 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVE 674
GAL QTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVE
Sbjct: 136 GALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVE 195
Query: 675 NVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLM 854
N+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA KF + + KLM
Sbjct: 196 NINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGKFGVQVDKLM 255
Query: 855 NRLWGENFFNPQTXXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGV 1034
LWG+ FF+ +T R FC +V DPI+ VFDA+M K L++K+G+
Sbjct: 256 KNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGI 315
Query: 1035 XIXHEDSDKXGK 1070
+ +++ D GK
Sbjct: 316 KLANDEKDLEGK 327
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 372 bits (916), Expect = e-103
Identities = 189/312 (60%), Positives = 218/312 (69%), Gaps = 8/312 (2%)
Frame = +3
Query: 159 QRNLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAI 338
+RN+RNMSV+AHVDHGKSTLTDSLVSK RFTDTRKD Q RCITIKSTAI
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAI 75
Query: 339 SMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTAALRVTD 494
S+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEVTAAL VTD
Sbjct: 76 SLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTD 135
Query: 495 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVE 674
GAL QTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVE
Sbjct: 136 GALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVE 195
Query: 675 NVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLM 854
N+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA KF + + KLM
Sbjct: 196 NINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGKFGVQVDKLM 255
Query: 855 NRLWGENFFNPQTXXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGV 1034
LWG+ FF+ +T R FC +V DPI+ VFDA+M K L++K+G+
Sbjct: 256 KNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGI 315
Query: 1035 XIXHEDSDKXGK 1070
+ +++ D GK
Sbjct: 316 KLANDEKDLEGK 327
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical protein
K10C3.5b protein.
Length = 705
Score = 138 bits (334), Expect = 7e-33
Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 12/304 (3%)
Frame = +3
Query: 165 NLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISM 344
++RN+ ++AHVDHGK++ DSLVS R+ D+R+D Q R IT+KS+ IS+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISL 78
Query: 345 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 524
E LINLIDSPGHVDFS EVT+AL ++D AL
Sbjct: 79 LCE--------------------PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIE 118
Query: 525 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY- 701
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 119 GICSQTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVL 178
Query: 702 ------NDDGGPMGE----VRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKL 851
+D G + E + DP+KG+V F S LH +AF + F+++ A+K K++ L
Sbjct: 179 GGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFGCEDFAQIAAEKMKVEKSAL 238
Query: 852 MNRLWGENFFNPQTXXXXXXXXXXXXRSFCMYVXDPIYKVFD-AIMKFXKXXIDDLLKKM 1028
+ ++G+ + + F V +P++++ D +++ + + KK+
Sbjct: 239 LPAMFGDFWIDSTGSIRDGAAVKNKATLFERIVLEPLWRIHDLGLVENDATKLAEAAKKL 298
Query: 1029 GVXI 1040
G+ +
Sbjct: 299 GINL 302
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 138 bits (334), Expect = 7e-33
Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 12/304 (3%)
Frame = +3
Query: 165 NLRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISM 344
++RN+ ++AHVDHGK++ DSLVS R+ D+R+D Q R IT+KS+ IS+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISL 78
Query: 345 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 524
E LINLIDSPGHVDFS EVT+AL ++D AL
Sbjct: 79 LCE--------------------PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIE 118
Query: 525 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY- 701
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 119 GICSQTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVL 178
Query: 702 ------NDDGGPMGE----VRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKL 851
+D G + E + DP+KG+V F S LH +AF + F+++ A+K K++ L
Sbjct: 179 GGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFGCEDFAQIAAEKMKVEKSAL 238
Query: 852 MNRLWGENFFNPQTXXXXXXXXXXXXRSFCMYVXDPIYKVFD-AIMKFXKXXIDDLLKKM 1028
+ ++G+ + + F V +P++++ D +++ + + KK+
Sbjct: 239 LPAMFGDFWIDSTGSIRDGAAVKNKATLFERIVLEPLWRIHDLGLVENDATKLAEAAKKL 298
Query: 1029 GVXI 1040
G+ +
Sbjct: 299 GINL 302
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 131 bits (316), Expect = 1e-30
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 4/312 (1%)
Frame = +3
Query: 168 LRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXX-RFTDTRKDXQXRCITIKSTAISM 344
+RN+++ H+ HGK+T D L+ + RFTD + R +IKS +S
Sbjct: 132 MRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVS- 190
Query: 345 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 524
I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG +
Sbjct: 191 -----------IVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 236
Query: 525 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYN 704
TE +R AI ER+ L ++K+DR Y + I++ VN I++T+
Sbjct: 237 GVMMNTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFA 296
Query: 705 DDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKF--KIDLVKLMNRLWGENF 878
++ P+ + P G+V F SG + F+L FS +YA + + + RLWG+ +
Sbjct: 297 EEDVPV----LSPLNGNVIFSSGRYNVCFSLLSFSNIYAKQHGDSFNSKEFARRLWGDIY 352
Query: 879 FNPQT-XXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGVXIXHEDS 1055
F +T R+F ++ +P+YK+F ++ + D++ ++G+ + E+
Sbjct: 353 FEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGIRLSKEEQ 412
Query: 1056 DKXGKXC*RLXC 1091
+ L C
Sbjct: 413 KMNVRPLIALIC 424
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 131 bits (316), Expect = 1e-30
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 4/312 (1%)
Frame = +3
Query: 168 LRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXX-RFTDTRKDXQXRCITIKSTAISM 344
+RN+++ H+ HGK+T D L+ + RFTD + R +IKS +S
Sbjct: 7 MRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVS- 65
Query: 345 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 524
I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG +
Sbjct: 66 -----------IVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 111
Query: 525 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYN 704
TE +R AI ER+ L ++K+DR Y + I++ VN I++T+
Sbjct: 112 GVMMNTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFA 171
Query: 705 DDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKF--KIDLVKLMNRLWGENF 878
++ P+ + P G+V F SG + F+L FS +YA + + + RLWG+ +
Sbjct: 172 EEDVPV----LSPLNGNVIFSSGRYNVCFSLLSFSNIYAKQHGDSFNSKEFARRLWGDIY 227
Query: 879 FNPQT-XXXXXXXXXXXXRSFCMYVXDPIYKVFDAIMKFXKXXIDDLLKKMGVXIXHEDS 1055
F +T R+F ++ +P+YK+F ++ + D++ ++G+ + E+
Sbjct: 228 FEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGIRLSKEEQ 287
Query: 1056 DKXGKXC*RLXC 1091
+ L C
Sbjct: 288 KMNVRPLIALIC 299
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 66.9 bits (156), Expect = 3e-11
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Frame = +3
Query: 168 LRNMSVLAHVDHGKSTLTDSLV--SKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAIS 341
LRN+ V+AHVD GK+T+T+ L+ + TD + R IT++S A++
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVN 84
Query: 342 MFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 521
+ + KG INLID+PGHVDF EV +RV DG +
Sbjct: 85 LDW--------------------KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGS 124
Query: 522 XXXXXQTETVLRQAIAERIKPILFMNKMDR 611
QT TV RQ+ ++ F+NKMD+
Sbjct: 125 AGVQPQTLTVWRQSSKFKLPAHFFINKMDK 154
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 64.9 bits (151), Expect = 1e-10
Identities = 47/147 (31%), Positives = 69/147 (46%)
Frame = +3
Query: 168 LRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMF 347
+RN ++AHVDHGKSTL D L+ + D + + R IT+K+ ++
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQK---QMLDKLQVERERGITVKAQTAAL- 97
Query: 348 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 527
+G+L+NLID+PGHVDFS+EV+ +L V DG L
Sbjct: 98 -------------------RHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Query: 528 XXXQTETVLRQAIAERIKPILFMNKMD 608
QT A + I+ I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNIQIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 63.3 bits (147), Expect = 3e-10
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +3
Query: 168 LRNMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISM- 344
+RN+ + AH+D GK+T+T+ ++ + R D +M
Sbjct: 44 IRNIGISAHIDSGKTTVTERIL---------------YYAGRIDSMHEVRGKDDVGATMD 88
Query: 345 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 524
F +LE + + I + G IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 89 FMDLERQRGITIQSA-ATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVG 147
Query: 525 XXXXQTETVLRQAIAERIKPILFMNKMDR 611
QT TV RQ + I F+NKMDR
Sbjct: 148 GVQSQTFTVNRQLARYNVPFICFVNKMDR 176
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.10
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + HVDHGK+TLT ++ D + + R ITI + F
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINA------FH 104
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 533
LE E +++ + ID PGH D+ + +GA+
Sbjct: 105 LE------------YETAKRHYA--HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPM 150
Query: 534 XQTETVL---RQAIAERIKPILFMNKMD 608
QT L RQ ++FMNK+D
Sbjct: 151 PQTREHLLLARQVGVPLDNIVVFMNKVD 178
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.10
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + HVDHGK+TLT ++ D + + R ITI + F
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINA------FH 105
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 533
LE E +++ + ID PGH D+ + +GA+
Sbjct: 106 LE------------YETAKRHYA--HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPM 151
Query: 534 XQTETVL---RQAIAERIKPILFMNKMD 608
QT L RQ ++FMNK+D
Sbjct: 152 PQTREHLLLARQVGVPLDNIVVFMNKVD 179
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.10
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + HVDHGK+TLT ++ D + + R ITI + F
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINA------FH 105
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 533
LE E +++ + ID PGH D+ + +GA+
Sbjct: 106 LE------------YETAKRHYA--HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPM 151
Query: 534 XQTETVL---RQAIAERIKPILFMNKMD 608
QT L RQ ++FMNK+D
Sbjct: 152 PQTREHLLLARQVGVPLDNIVVFMNKVD 179
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 33.5 bits (73), Expect = 0.31
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 414 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILF 593
GFLI ID+PGH FS+ T + D A+ QT L+ I + ++
Sbjct: 550 GFLI--IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKLLIKGKTPFVIA 607
Query: 594 MNKMDR 611
+NK+DR
Sbjct: 608 LNKIDR 613
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -3
Query: 571 SAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRW 392
+AI ++ + T +T STT+ P +T + + +E T S+ P L RW
Sbjct: 691 TAIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERW 750
Query: 391 SGFVMNTK 368
V K
Sbjct: 751 KAIVNKFK 758
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 31.9 bits (69), Expect = 0.96
Identities = 30/110 (27%), Positives = 46/110 (41%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + H+DHGK+TLT ++ D K+ + R ITI I
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGY--- 103
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 503
E L ++ D S+ F+ N+I +D + V AA TDG +
Sbjct: 104 --ESPLRRYSHTDCPGHSD--FIKNMICGTSQMDVAVLVIAA---TDGVM 146
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 31.9 bits (69), Expect = 0.96
Identities = 30/110 (27%), Positives = 46/110 (41%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ + H+DHGK+TLT ++ D K+ + R ITI I
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGY--- 103
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 503
E L ++ D S+ F+ N+I +D + V AA TDG +
Sbjct: 104 --ESPLRRYSHTDCPGHSD--FIKNMICGTSQMDVAVLVIAA---TDGVM 146
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTTTRAPSVTRS-AAVTSEEKSTCPGESIKLIKKP 413
+T + T T T +TTT P+ T + A TSE +T P + + KP
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKK 416
+T + T + +TTT APS T + VT K P E KL+KK
Sbjct: 764 TTAAPSTKPAEETTTTTEAPSTT-TKPVTVAVKKVSPEEMEKLVKK 808
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -3
Query: 436 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQ 311
S+ L+ PF L +R +G+ + FSS S + MAV ++ +Q
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQ 109
>AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical
protein C47F8.8 protein.
Length = 347
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 530 HTRHTVNNHKGSISDTECSCYFRREINV 447
H T H G IS T C+ +FRR I +
Sbjct: 15 HNTETTRRHFGIISCTACAAFFRRSIGM 42
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 523 DTQSTTTRAPSVTRSAAVTSEEKSTCPGESIK 428
D+ +T R+P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>Z82264-6|CAB05157.1| 214|Caenorhabditis elegans Hypothetical
protein C49C3.12 protein.
Length = 214
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 81 FHXTKIINXLKWCISRYPRSVGCWXSQRNLR 173
FH + +N + WCI YP ++ W ++R R
Sbjct: 20 FHKSNRVNGV-WCIKVYPGNMTWWEAERECR 49
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCP 443
ST + T T T +TTT AP+ T + T+E P
Sbjct: 210 STSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPIP 246
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.1 bits (62), Expect = 6.8
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 177 MSVLAHVDHGKSTLTDSL 230
++++ HVDHGK+TL D++
Sbjct: 159 VTIMGHVDHGKTTLLDAM 176
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +3
Query: 411 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPIL 590
KG + +D+PGH F+S + D + QT ++ A ++ ++
Sbjct: 202 KGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQLVV 261
Query: 591 FMNKMDR 611
+NK+D+
Sbjct: 262 AVNKIDK 268
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 535 THTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESI---KLIKKPFSLF 401
T T T +TTT AP++ + + T+E+ +T +I + +K FS F
Sbjct: 218 TTTTTTTTTTTEAPTMPEAVSSTTEQSTTTTAAAIIAEETKEKEFSAF 265
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 464
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 553 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 464
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,641,637
Number of Sequences: 27780
Number of extensions: 480564
Number of successful extensions: 1560
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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