Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F16
(1233 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.036
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 28 0.15
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 28 0.15
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.78
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.78
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 1.8
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 2.4
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 2.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 9.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 9.6
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.036
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 408 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 587
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 588 LFMNKMDR 611
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.9 bits (64), Expect = 0.048
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 177 MSVLAHVDHGKSTLTDSL 230
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.15
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSK 239
N+ V+ HVD GKST T L+ K
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYK 30
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.15
Identities = 26/110 (23%), Positives = 46/110 (41%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSLVSKXXXXXXXXXXXXRFTDTRKDXQXRCITIKSTAISMFFE 353
N+ V+ HVD GKST T L+ K +F ++ + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIE--KFEKEAQEMGKG--SFKYAWVLDKLK 64
Query: 354 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 503
E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.78
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 514 TVCLVCVYKPKQYCVRLLP 570
TV LVC+Y PK Y + P
Sbjct: 749 TVTLVCLYSPKIYIILFQP 767
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.78
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 514 TVCLVCVYKPKQYCVRLLP 570
TV LVC+Y PK Y + P
Sbjct: 839 TVTLVCLYSPKIYIILFQP 857
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 1.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 174 NMSVLAHVDHGKSTLTDSL 230
N+ + HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 417 FLINLIDSPGHVDFSSEVTAALRVTDGAL 503
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 417 FLINLIDSPGHVDFSSEVTAALRVTDGAL 503
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 9.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 5 TRPYRAFFLLPPFSKRPPLLGVXSLVSSHKNH 100
TRP F LPP + P S V NH
Sbjct: 150 TRPDTKFIQLPPLYEMCPYFFFNSEVLQKANH 181
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 9.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 5 TRPYRAFFLLPPFSKRPPLLGVXSLVSSHKNH 100
TRP F LPP + P S V NH
Sbjct: 150 TRPDTKFIQLPPLYEMCPYFFFNSEVLQKANH 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,719
Number of Sequences: 438
Number of extensions: 5683
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -