Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F15
         (1245 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.67 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    26   0.67 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   1.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.6  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 778 RMYQQYHSTPSFRSC*PVLKTAPSEYGTQAPTGSS 882
           + +QQ+H    F+S       AP+ Y + +P+GSS
Sbjct: 13  KYHQQFHHQQLFQSA---TTEAPAAYSSSSPSGSS 44


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 778 RMYQQYHSTPSFRSC*PVLKTAPSEYGTQAPTGSS 882
           + +QQ+H    F+S       AP+ Y + +P+GSS
Sbjct: 13  KYHQQFHHQQLFQSA---TTEAPAAYSSSSPSGSS 44


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -2

Query: 761 CLYTCLI----LVIPYFDEPVISSTDEVGLVTAMIIVHAVDAF 645
           C+ T L+    L I Y+ +P+ +   E   + AM++   V+AF
Sbjct: 34  CVVTALVTPSALSIIYYRQPIYAKISETKSIVAMVMGTIVNAF 76


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 794 YC*YILNMTFQCLYTCLILVIPYFDEPVI 708
           Y  Y+ +  ++ LYT   LV+ Y DE +I
Sbjct: 60  YSIYVRHTYYRRLYTITHLVLDYLDEFLI 88


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 794 YC*YILNMTFQCLYTCLILVIPYFDEPVI 708
           Y  Y+ +  ++ LYT   LV+ Y DE +I
Sbjct: 60  YSIYVRHTYYRRLYTITHLVLDYLDEFLI 88


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 89  NASASGSQXEADGAVGPSEMRRPA 160
           +A+A+     ADGA GP    RPA
Sbjct: 286 DAAAARGAARADGAGGPLHDHRPA 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,265
Number of Sequences: 336
Number of extensions: 6316
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36480155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)