Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F11
         (1228 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   4.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   4.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   8.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 813 TNKRLNIFNKYCVSIQIIRKLWK 881
           TNK+LN  NK C     + KL K
Sbjct: 495 TNKQLNTLNKICALHHHLSKLVK 517


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 813 TNKRLNIFNKYCVSIQIIRKLWK 881
           TNK+LN  NK C     + KL K
Sbjct: 220 TNKQLNTLNKICALHHHLSKLVK 242


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 314 PENAAYYGNRSACYMMLCMYKKAL 385
           P N  YY + + CY  L M  K L
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKIL 57


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 540 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 421
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 540 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 421
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 540 SPLTHSTPPNSVARRTACS 484
           SPL HS  P + +R T  S
Sbjct: 115 SPLFHSAAPRTASRETKSS 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,348
Number of Sequences: 336
Number of extensions: 4925
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35863589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)