Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F10
(1222 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 268 5e-72
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 218 8e-57
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 154 2e-37
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 145 5e-35
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 94 2e-19
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 37 0.028
01_06_0073 + 26191822-26192116,26192227-26192445,26193655-261938... 34 0.20
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 33 0.60
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 32 0.80
03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087 30 3.2
01_06_0077 + 26215954-26216224,26216355-26216579,26217099-262172... 30 4.2
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 9.8
>02_05_0373 + 28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 268 bits (658), Expect = 5e-72
Identities = 129/282 (45%), Positives = 189/282 (67%), Gaps = 6/282 (2%)
Frame = +3
Query: 174 PTMIGGLFVYNHKGXVLISXVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHI 353
P ++ N +G VLI+ +YRDD+G N VDAFR++++ ++ PV I SF ++
Sbjct: 2 PVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLYM 61
Query: 354 KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFG-KISEENIKNNFVLIYELLDEILD 530
+ +N+++ V N N A F+F+++ + + +SYFG E+ I+NNFVLIYELLDEI+D
Sbjct: 62 RISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121
Query: 531 FGYPQNSDTGVLKTFITQQGIKS--ASKEEQAQI---TSQVTGQIGWRREGIKYRRNELF 695
FGYPQN +LK +ITQ+G++S +SK + T QVTG +GWRREG+ Y++NE+F
Sbjct: 122 FGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVF 181
Query: 696 LDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISG 875
LD++E VNLLMS +G VL V GK++MK +LSGMP+ K G+NDKI +E + +
Sbjct: 182 LDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKEAQ------- 234
Query: 876 NTDSDPARSGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPD 1001
S PA+SGK + +DD FHQCV L +F +E ++SF+PPD
Sbjct: 235 -LKSRPAKSGK-TIELDDVTFHQCVNLTRFNSEKTVSFVPPD 274
>01_06_0412 + 29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 218 bits (532), Expect = 8e-57
Identities = 107/276 (38%), Positives = 173/276 (62%), Gaps = 3/276 (1%)
Frame = +3
Query: 183 IGGLFVYNHKGXVLISXVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVT-NIARTSFFHI 353
+ LF+ + KG VL+ YR D+ + F ++ + SPV + A ++ I
Sbjct: 5 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFI 64
Query: 354 KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDF 533
+ N++L ++QN NAA + FL +++DV + YF ++ EE++++NFV++YELLDE++DF
Sbjct: 65 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDF 124
Query: 534 GYPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEY 713
GYPQ ++ +L FI + E + VT + WR EGI+Y++NE+FLDV+E
Sbjct: 125 GYPQYTEAKILSEFIKTDAYRM---EVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVES 181
Query: 714 VNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISGNTDSDP 893
VN+L++ GQ++ + V G + M++YLSGMPECK G+ND++++EA+G+
Sbjct: 182 VNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGR------------- 228
Query: 894 ARSGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPD 1001
A GK + +DD +FHQCV+L +FE + +ISFIPPD
Sbjct: 229 ATKGK-AIDLDDIKFHQCVRLARFENDRTISFIPPD 263
>07_03_1297 + 25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 154 bits (373), Expect = 2e-37
Identities = 86/291 (29%), Positives = 160/291 (54%), Gaps = 17/291 (5%)
Frame = +3
Query: 180 MIGGLFVYNHKGXVLISXVYRDDIGRNAVDAF--RVNVIHARQQVRSP-VTNIARTSFFH 350
MI FV + +G ++ YR ++ + + + F +V + + +P V N+ ++ H
Sbjct: 1 MISQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIH 60
Query: 351 IKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILD 530
+K A ++ T NV+ +++ E L +I V + Y G ++E++++ NF+L+YELLDE++D
Sbjct: 61 VKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVID 120
Query: 531 FGYPQNSDTGVLKTFITQQGIKSAS-------------KEEQAQITSQVTGQIGWRREGI 671
FGYPQ + T VLK++I + I + + + + VT + G
Sbjct: 121 FGYPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGG 180
Query: 672 KYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKG 851
K +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE + +N+ + +
Sbjct: 181 K-KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSI---- 235
Query: 852 KGNGGISGNTDSD-PARSGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPD 1001
G +G++ D + SG V++DDC FH+ V L F+ + ++ IPPD
Sbjct: 236 ----GRTGSSSYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLIPPD 282
>05_06_0262 - 26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 145 bits (352), Expect = 5e-35
Identities = 91/276 (32%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
Frame = +3
Query: 183 IGGLFVYNHKGXVLISXVYRDDIGRNAVDAFRVNVIHARQ--QVRSPVTNI-ARTSFFHI 353
+ LF+ + KG VL+ YR D+ + F ++ +V SPV + A S+ I
Sbjct: 6 VSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFI 65
Query: 354 KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDF 533
+ N++L ++QN NAA + FL +++DV + YF ++ EE++++NFV++Y E+LD
Sbjct: 66 QHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVY----ELLD- 120
Query: 534 GYPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEY 713
+ D G + +A I S+ +R E +FLDV+E
Sbjct: 121 ---EMMDFGY-------------PQYTEAMILSEFIKTDAYRME--------VFLDVVES 156
Query: 714 VNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISGNTDSDP 893
VN+L++ GQ++ + V G++ M+++LSGMPECK G+ND++++EA+G+ G
Sbjct: 157 VNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKG--------- 207
Query: 894 ARSGKPVVVIDDCQFHQCVKLXKFETEHSISFIPPD 1001
+ +DD +FHQCV+L +FE + +ISFIPPD
Sbjct: 208 -----KAIDLDDIKFHQCVRLARFENDRTISFIPPD 238
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 93.9 bits (223), Expect = 2e-19
Identities = 43/149 (28%), Positives = 84/149 (56%)
Frame = +3
Query: 393 NVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKT 572
+VN F+FL ++ DV+ Y G ++E+ IK+NFVL+Y++LDE++D G+P ++ +LK
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 573 FITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLS 752
I I S +T + WR +K NE++++++E ++ ++ +G ++
Sbjct: 151 MIAPPNIVSKMLN---VVTDAAASFVPWRTTVVKDASNEVYVNIVEELDACVNREGALVK 207
Query: 753 AHVAGKVVMKSYLSGMPECKFGINDKIVM 839
GK+ + S L G+PE ++ ++
Sbjct: 208 CEAYGKIQVNSSLPGVPELTLSFSNPTII 236
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 37.1 bits (82), Expect = 0.028
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 360 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 539
A+++ N V E + ++V+ YFG + E ++ NF Y +LDEIL G
Sbjct: 174 ASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAGE 233
Query: 540 PQNSDTGVLKTFITQQ 587
Q S + I Q
Sbjct: 234 LQESSKKNVARLIAAQ 249
>01_06_0073 +
26191822-26192116,26192227-26192445,26193655-26193803,
26193910-26194186,26194683-26194963
Length = 406
Score = 34.3 bits (75), Expect = 0.20
Identities = 28/79 (35%), Positives = 40/79 (50%)
Frame = +3
Query: 639 TGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFG 818
TG + W E +Y N+L +D LE + L P ++ A G M+ +LS PE +FG
Sbjct: 261 TGCLRWMNEFSQYH-NKLLIDELEKLRKL-HPDVAIIYADYYG-AAMEVFLS--PE-QFG 314
Query: 819 INDKIVMEAKGKGNGGISG 875
I D + G G G+SG
Sbjct: 315 IKDPLTACCGGGGPYGVSG 333
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 32.7 bits (71), Expect = 0.60
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 462 KISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVT 641
KI + + I EL+ + DF YP + T + S++ QI++++
Sbjct: 265 KIDNRPLSESLDEIKELIYDAEDFPYPGKGSSAAACTNPEESSASSSTPSYIQQISNRMN 324
Query: 642 GQIGWRREGIKYRRNE 689
I W +G K +R E
Sbjct: 325 QNISWVMDGKKRKREE 340
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 462 KISEENIKNNFVLIYELLDEILDFGYPQNSD-TGVLKTFITQQGIKSASKEEQAQI 626
++ E ++ NF Y +LDE+L G Q S+ VL+ TQ + A+KEE + +
Sbjct: 163 QVCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVEAAKEEASSL 218
>03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087
Length = 128
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 789 LSGMPECKFGINDKIVMEAKGKGNGGISGNTDSDPARSG 905
+ G P G ND+I EA G GG G +D P R G
Sbjct: 3 VGGSPVLAAGANDEIGEEAMA-GGGGSVGESDGQPTRPG 40
>01_06_0077 +
26215954-26216224,26216355-26216579,26217099-26217247,
26217353-26217629,26217956-26218236
Length = 400
Score = 29.9 bits (64), Expect = 4.2
Identities = 33/113 (29%), Positives = 52/113 (46%)
Frame = +3
Query: 540 PQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVN 719
P N G + ++ Q +S KE+ G + W E +Y N+L +D LE +
Sbjct: 228 PGNIPIGCIPMYLMQ--FESDKKEDY----EPKIGCLRWMNEFSQYH-NKLLVDELENLR 280
Query: 720 LLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISGN 878
L ++ A G M+ +LS PE +FGI D +V G+G G+S +
Sbjct: 281 KLHLDV-TIIYADYYG-AAMEVFLS--PE-RFGIEDPLVACCGGRGPYGVSAS 328
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -2
Query: 774 PLSQPREQRALDLAVTSTS*HTLVHQGTARFVCT*CLHGASQSDQLLVR*SGLVPPWR 601
P S P +Q D V + S TL+ T RFVC C G + L + G PW+
Sbjct: 21 PASTPSQQNP-DAEVIALSPRTLM--ATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,917,810
Number of Sequences: 37544
Number of extensions: 602233
Number of successful extensions: 1507
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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