Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_F09
(1173 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0653 - 4856197-4856268,4857464-4857506,4857607-4857661,485... 169 4e-42
06_03_0869 + 25548853-25549074,25549191-25549251,25549912-255500... 166 3e-41
06_03_0702 - 23692525-23692613,23692711-23693473 31 2.3
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078 31 2.3
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 30 4.1
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 30 4.1
09_02_0339 + 7452967-7453068,7453281-7453339,7453889-7454701,745... 29 5.4
08_01_0601 - 5268520-5271112,5272448-5272950 29 5.4
05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024... 29 5.4
05_07_0095 - 27659944-27660795,27660900-27661172,27661280-276613... 29 5.4
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 29 7.1
05_06_0059 - 25264704-25266032 29 7.1
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940... 29 7.1
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395... 29 7.1
11_04_0370 + 16891334-16891469,16891556-16891707,16893277-168936... 29 9.4
>02_01_0653 -
4856197-4856268,4857464-4857506,4857607-4857661,
4857867-4857900,4857989-4858083,4858720-4858780,
4858858-4858932
Length = 144
Score = 169 bits (411), Expect = 4e-42
Identities = 74/137 (54%), Positives = 103/137 (75%), Gaps = 3/137 (2%)
Frame = +2
Query: 203 IGSAWFQRKLNLRPQHRGVHLVTEEILKQVP-ELSQFAVGLCHIQIMHTSASLALNESWD 379
+ + W Q+ + + Q RG HL+T +IL+++ +LS F GL H+ + HTSASL +NE++D
Sbjct: 1 MAAKWAQKTIVIPAQRRGCHLITPKILREIEGDLSGFKCGLAHLFLQHTSASLTINENYD 60
Query: 380 PNVRDDMEMMLNKIVPEG--LPYRHSCEGPDDMPAHVKACFLGSSLTIPITDGKLNLGTW 553
+V+ D E LN+IVPEG P++H+ EGPDDMPAH+K+ G +LTIPITDG LN+GTW
Sbjct: 61 SDVQADTETFLNRIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITDGHLNMGTW 120
Query: 554 QGVWLCEHRNHAGSRKI 604
QG+WLCEHR++A SRKI
Sbjct: 121 QGIWLCEHRDNASSRKI 137
>06_03_0869 +
25548853-25549074,25549191-25549251,25549912-25550006,
25550094-25550127,25550551-25550605,25550687-25550729,
25551064-25551135
Length = 193
Score = 166 bits (403), Expect = 3e-41
Identities = 72/133 (54%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Frame = +2
Query: 215 WFQRKLNLRPQHRGVHLVTEEILKQV-PELSQFAVGLCHIQIMHTSASLALNESWDPNVR 391
W QR + + PQ RG HL+T +I+ + +LS+F G+ H+ + HTSASL +NE++D +V+
Sbjct: 54 WAQRTVVIPPQRRGCHLITPKIVNGIRDDLSEFKCGMAHLFLQHTSASLTINENYDSDVQ 113
Query: 392 DDMEMMLNKIVPEG--LPYRHSCEGPDDMPAHVKACFLGSSLTIPITDGKLNLGTWQGVW 565
D E L++IVPEG P+RH+ EGPDDMPAH+K+ G +LTIPITDG+LN+GTWQG+W
Sbjct: 114 FDTETFLSRIVPEGPSAPWRHTIEGPDDMPAHIKSSMFGCALTIPITDGRLNMGTWQGIW 173
Query: 566 LCEHRNHAGSRKI 604
LCEHR++A R+I
Sbjct: 174 LCEHRDYATPRQI 186
>06_03_0702 - 23692525-23692613,23692711-23693473
Length = 283
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 783 GRGVC-GAGFTSACSWRRGASACAGSR 706
G GVC G+ F A WRRGA A A R
Sbjct: 194 GAGVCRGSSFPMAIDWRRGAGAVAVRR 220
>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
Length = 455
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 783 GRGVC-GAGFTSACSWRRGASACAGSR 706
G GVC G+ F A WRRGA A A R
Sbjct: 279 GAGVCRGSSFPMAIDWRRGAGAVAMRR 305
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 375 QLSFRARLAEVCIICI*QRPTANCDSSGTCFRISSVTRCTPR 250
Q SF + L + + ++PT+ D S CF SS+ R +PR
Sbjct: 591 QTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERISPR 632
>02_04_0157 +
20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 873 RRIKKYSTQNIKISILCTYCLSYVRNVWYVGRGVCGAGFTSACSWR 736
R+ +Y Q I+ +YC SY+ + Y+ G+ A T+ C+WR
Sbjct: 835 RKELQYRQQTKAAVIIQSYCRSYLAHSQYM--GLKKAAITTQCAWR 878
>09_02_0339 +
7452967-7453068,7453281-7453339,7453889-7454701,
7455123-7455498,7455978-7456019
Length = 463
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 248 HRGVHLVTEEILKQVPELSQFAVGLCHIQIMHTSASLALNESWDPNVRDDMEMMLNKIVP 427
H+ VH++ + QV +F + LC + + + AL + DP V ++ + + P
Sbjct: 156 HQVVHIINHQYHFQVVRTIRFPLALCLVHLTSEVRTDAL-LAGDPMVLNNGDFNARFVCP 214
Query: 428 EGLPYRHSC 454
+ L R +C
Sbjct: 215 DNLDNRRNC 223
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 464 DDMPAHVKACFL---GSSLTIPITDGKL 538
DD+P H+K CFL G + PI GKL
Sbjct: 486 DDLPTHLKPCFLYFAGFTAQTPICAGKL 513
>05_07_0224 +
28500745-28500978,28501933-28502332,28502416-28502480,
28502633-28502692,28502865-28503014,28503386-28503541,
28503648-28503785,28503874-28503947,28504172-28504273,
28505415-28505604,28505756-28505830
Length = 547
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = -3
Query: 463 RSLARVAVR*TLWHYLVEHHFHVIPHIRIPTLI*SKTRRSVHYLYMTEADRELRQFRHLF 284
R LA+ VR ++ ++E+H H++ + + ++Y + DR RQF HL
Sbjct: 387 RKLAKDDVRELIYREILEYHPHMLQEYL-------RGGDQMSFMYPSGVDRFKRQFAHLE 439
Query: 283 QDLLCDEVHAPVLWPQIQLP 224
+ + E +P L LP
Sbjct: 440 EGVSKGEKSSPQLRQNASLP 459
>05_07_0095 -
27659944-27660795,27660900-27661172,27661280-27661354,
27661683-27661837,27661935-27662051,27662148-27662487
Length = 603
Score = 29.5 bits (63), Expect = 5.4
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = -2
Query: 488 LSHGLAYHQVPRK-SGGKVDPLALSC*ASFPCHPSH*DPNSHLEQDSP---KCALSVYDR 321
+ HGL + R S PLALS +S S DP S ++ + P + ALS
Sbjct: 8 IGHGLDRFRWRRSTSSSSSSPLALSLSSSSAAALSDDDPGSPMDPEMPPAARRALSRSSG 67
Query: 320 GRPRIATVPAPVSGSPL*RGARPGAVASNSA 228
R R++ P++G P + P +S A
Sbjct: 68 SRGRLSFELPPLAGGPSDKEEAPPRTSSAPA 98
>10_08_0352 +
17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 464 DDMPAHVKACFLGSSLTIP--ITDGKLNLGTWQGVWLCEHRNHAGSRKI 604
DDMP H+K CFL SL + D + + W + R AG ++
Sbjct: 423 DDMPCHLKQCFLYCSLFLSDFAVDRRSLVQQWIAEGFVQIRGDAGVEEV 471
>05_06_0059 - 25264704-25266032
Length = 442
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 679 DAADTGDSGESRRQPDSVTTICTTPNLSTASMISVFTQPNALPCTQI 539
D D GD GES ++PD+ +T +++ P A +Q+
Sbjct: 313 DDDDDGDDGESSKKPDTTCLPTEAAATATTPLVAAAASPPATQTSQL 359
>03_05_1097 +
30393336-30393578,30393661-30393780,30393859-30394017,
30394184-30394225,30394336-30394508,30394600-30394705,
30394795-30394824
Length = 290
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 415 VEHHFHVIPHIRIPTLI*SKTRRSVHYLYMTEADRELRQFRHLF 284
VE H PHI +P+ + TR S HYLY + ++R R + H F
Sbjct: 43 VEGHHVQKPHI-VPSCKVNFTRAS-HYLYRSLSERTTRHWLHRF 84
>03_01_0526 +
3956909-3957071,3957262-3957317,3957398-3957462,
3957560-3958006,3958102-3958227,3958328-3958511,
3958788-3958943
Length = 398
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 184 LEPRNSDWIRVVSKEAEFEATAPGRAPRHRG--DPETGAGTV 303
+EP++ DW RVVS+ E AP DPE G V
Sbjct: 4 MEPKDIDWSRVVSRYVRDETYEGIEAPHWADLTDPEAGVAAV 45
>11_04_0370 +
16891334-16891469,16891556-16891707,16893277-16893639,
16893832-16893929,16893983-16896029
Length = 931
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 395 DMEMMLNKIVPE-GLPYRHSCEGPDDMPAHVKACFLGSSLTIPIT--DGKLNLGTWQGVW 565
D+E N+++P L Y+H MP H+K CF+ SL + T D + + W+ +
Sbjct: 314 DLERSQNEVLPALELSYKH-------MPMHLKLCFVSLSLYLKDTYFDESIVVWLWKSLH 366
Query: 566 LCE 574
L +
Sbjct: 367 LLQ 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,895,487
Number of Sequences: 37544
Number of extensions: 582713
Number of successful extensions: 1806
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3584899172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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