Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F08
         (1224 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   6.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   8.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   8.1  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 368 TPSAVILSSSCWSLYLLKSCSSFFLSTEVFMEXL*YASGFWK*LSLARXNFQSF-CERQ 195
           T + +++ SS    YL KS +   L   V M+ + Y   FW  L      FQ F C+ +
Sbjct: 33  TLTLLVILSSIDRPYL-KSYTYIKLVVSVLMDFIAYFFNFWTILFSRSDFFQQFECDNE 90


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 292 DRKKLEQLFNKYRDQQELDK 351
           D+KK + +  KY + +EL+K
Sbjct: 262 DKKKKKTIKEKYTEDEELNK 281


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 922 GSPPLEVTAPNIEQDYSSTDXPSST 996
           G P    T+ N+    SST   SST
Sbjct: 155 GKPATSTTSQNLSSPASSTSSTSST 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,460
Number of Sequences: 336
Number of extensions: 4380
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35760828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)