Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F04
         (1213 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    73   2e-11
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    63   2e-08
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    52   2e-05
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    52   2e-05
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    42   0.042
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    39   0.30 
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    36   2.1  

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
            Escherichia coli|Rep: Putative uncharacterized protein -
            Escherichia coli
          Length = 147

 Score = 72.9 bits (171), Expect = 2e-11
 Identities = 50/116 (43%), Positives = 55/116 (47%)
 Frame = +2

Query: 671  RGKXVCVLGALPXPRSLTRCXRSFGXGERYQLTQRR*YGYPXNQGITQEXTCEQKAXKRP 850
            R   +C  G +P PRSLTR  RSFG GERY+LT           G   E T  +K   + 
Sbjct: 26   RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKE 75

Query: 851  XTVKXPXXWXFXIGSAPLTSITKIXAQXXGGEXRXDYXXXRXXPLXXPPXXLXSXP 1018
                 P    F IGSAPLTSI K  AQ  GGE R DY   R  PL  P   L   P
Sbjct: 76   EI--RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 62.9 bits (146), Expect = 2e-08
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +1

Query: 703 SXSSLTDSLXXVVRXXXAVSAHSKAVIRLSTXSGDNAGXNM 825
           S SSLTDSL  VVR   AVSAHSKAVIRLST SGDNAG NM
Sbjct: 19  SASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
            root|Rep: Putative uncharacterized protein - Salmonella
            typhimurium
          Length = 127

 Score = 52.4 bits (120), Expect = 2e-05
 Identities = 27/46 (58%), Positives = 27/46 (58%)
 Frame = +2

Query: 881  FXIGSAPLTSITKIXAQXXGGEXRXDYXXXRXXPLXXPPXXLXSXP 1018
            F IGSAPLTSITKI AQ  GGE R DY   R  PL  P   L   P
Sbjct: 16   FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
            organisms|Rep: Predicted protein - Nematostella vectensis
          Length = 97

 Score = 52.4 bits (120), Expect = 2e-05
 Identities = 28/54 (51%), Positives = 29/54 (53%)
 Frame = +2

Query: 857  VKXPXXWXFXIGSAPLTSITKIXAQXXGGEXRXDYXXXRXXPLXXPPXXLXSXP 1018
            V+ P    F IGSAPLTSITK  AQ  GGE R DY   R  PL  P   L   P
Sbjct: 44   VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 41.5 bits (93), Expect = 0.042
 Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 647 CXNESANXRGKXVCVLGALPXPRSLTRCXRSFGXGERYQL-TQRR*YGYPXNQGITQ 814
           C  + A  R + V VL ALP  RS TRC RS G G      +  R YG P  QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 38.7 bits (86), Expect = 0.30
 Identities = 20/43 (46%), Positives = 20/43 (46%)
 Frame = -1

Query: 847 PFXGLLLTCXFLRYPLIXWITVXXXXXXXXXXXXXERPXAASQ 719
           P    LLTC F  YPLI WITV             ERP  ASQ
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
            Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
            Beggiatoa sp. SS
          Length = 114

 Score = 35.9 bits (79), Expect = 2.1
 Identities = 21/77 (27%), Positives = 30/77 (38%)
 Frame = +2

Query: 788  YPXNQGITQEXTCEQKAXKRPXTVKXPXXWXFXIGSAPLTSITKIXAQXXGGEXRXDYXX 967
            +P N  I  +    + + + P T        F   S PLT+ITKI  Q    + + +Y  
Sbjct: 38   HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 968  XRXXPLXXPPXXLXSXP 1018
                PL  P   L   P
Sbjct: 98   TTPFPLQSPSYSLLFPP 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,611,603
Number of Sequences: 1657284
Number of extensions: 6995586
Number of successful extensions: 17052
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16826
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 122384806943
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)