Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F03
         (1240 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    26   0.67 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.7  

>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 TDTNIVNNPELMVYHGRGGAIEVSGTNEV 662
           TDTN +  P L   HG G  +  SGT+E+
Sbjct: 67  TDTNRITQPVLFWIHG-GDFVTGSGTSEM 94


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 503 MGLNRRRNLELDQRAQIFHENRAHDGYEH 589
           +G+NRRR+ E D + +   E +   G E+
Sbjct: 510 LGMNRRRDDEADVKTEDLDEIQKEKGDEY 538


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 503 MGLNRRRNLELDQRAQIFHENRAHDGYEH 589
           +G+NRRR+ E D + +   E +   G E+
Sbjct: 510 LGMNRRRDDEADVKTEDLDEIQKEKGDEY 538


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 503 MGLNRRRNLELDQRAQIFHENRAHDGYEH 589
           +G+NRRR+ E D + +   E +   G E+
Sbjct: 510 LGMNRRRDDEADVKTEDLDEIQKEKGDEY 538


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 503 MGLNRRRNLELDQRAQIFHENRAHDGYEH 589
           +G+NRRR+ E D + +   E +   G E+
Sbjct: 510 LGMNRRRDDEADVKTEDLDEIQKEKGDEY 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,271
Number of Sequences: 336
Number of extensions: 5368
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36274633
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)