Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F03
         (1240 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...   103   3e-22
Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical pr...    31   2.2  
Z83114-2|CAB05552.1|  114|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical ...    29   6.8  
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical...    29   9.0  
AF047657-4|AAK18948.3|  330|Caenorhabditis elegans Serpentine re...    29   9.0  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical protein
            C34C6.4 protein.
          Length = 599

 Score =  103 bits (247), Expect = 3e-22
 Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
 Frame = +3

Query: 321  AFXETLKASSVDWNF-TSVENNITSQALKXGIEQQPRGKXLGGSGSLNHMVYARGFPSDY 497
            A    L + + +W++ T+ + N+ ++         PRG+  GGS +LN M Y RG   DY
Sbjct: 85   ALMYNLCSDTYNWHYHTTAQKNLGNRVFYW-----PRGRVWGGSSTLNAMCYVRGHAYDY 139

Query: 498  HEWASIAGETWNWTNVLKYFMKTEHMTDTNIVNNPELMVYHGRGGAIEVSGTNEVMFSIK 677
            + W       WN+ N L YF K E  +D    N+P    Y G  G + V   +      K
Sbjct: 140  NRWEKEGASGWNYANCLPYFKKAETYSDATGPNDP----YRGNNGPLYVKKGDAENPLHK 195

Query: 678  KFLQAFEELGFKTVPDMTYPNSIGAGCFSHTIRNGERDSSLRALLNN-ANSTSLHILKDT 854
             +L   +E       DM      G      TI NGER S+ +A ++   N  +L      
Sbjct: 196  AWLNVGKEHPLGWTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSSGI 255

Query: 855  FVTKIIIENGTAIGIEAVK------DDKTFLF-----YADREVILSAGTFNTPKLLMLSG 1001
              T+++ +   AIGIE ++       D    +     Y   +VIL+ G  NTP+LLMLSG
Sbjct: 256  TCTRVLFDTNKAIGIEFIRKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSG 315

Query: 1002 VGRSXH 1019
            VG + H
Sbjct: 316  VGPADH 321


>Z74026-4|CAA98416.5|  774|Caenorhabditis elegans Hypothetical
           protein B0240.2 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 155 LCXRLKGIRAMVCGLXSCLGRGAAGGLFSSAVQFFAA 265
           +C + KG    VC L S +G+G  G    +AV F+AA
Sbjct: 297 ICHQAKGFSTEVCSLPSIIGKGVKG----AAVPFYAA 329


>Z83114-2|CAB05552.1|  114|Caenorhabditis elegans Hypothetical
           protein K09B11.3 protein.
          Length = 114

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 443 WKRLLESHGLCQGFSFRLPRM 505
           W RLLE   LC GF  R  R+
Sbjct: 30  WDRLLEERSLCDGFELRYERL 50


>AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical
           protein CD4.5 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
 Frame = -3

Query: 815 VKESPQRAVA---FAISDG-VRKTSCTDRVWVSHIRNCLETKFLERL*KFLNGEHNFIR- 651
           V ESP+ +++   + I D  +R  S   +V + +  NC       R   F  GE   I  
Sbjct: 243 VAESPKFSLSHDSYLIFDVYIRSVSPKLKVCIDNFENCPYNSPQLRKDAFWRGEQKLILK 302

Query: 650 --SRNFYSTSSTVVHHQFWIVNNVRI 579
             SR  +  +  V  HQF  ++N+R+
Sbjct: 303 EGSRKIFFVAENVKKHQFLAIDNIRL 328


>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
           protein Y105C5B.2 protein.
          Length = 1044

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = -1

Query: 712 LKPSSSNACRNFLMENITSFVPETSIAPPRPWYTINSGLLTMFVSVMCSVFMKYLSTLVQ 533
           +KP  S+ C   + +N   F+P + +    P YT + G    + + +CS F  ++   + 
Sbjct: 361 VKPRESDYCGGNMTKNCYEFLPSSPLLEDLPPYTSDCG----YDNNLCSDFHVFMIAAIV 416

Query: 532 FQV 524
           F +
Sbjct: 417 FSI 419


>AF047657-4|AAK18948.3|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein240 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 459 NHMVYARGFPSDYHEWASIAGETWNWTNVLKYFMKTEHMTDTNIVNNPELMVY 617
           NHM+  +    + H W+S++     +  V   F+      D  ++NNP L +Y
Sbjct: 45  NHMLTVKWLLFNTHIWSSLSDFVICFMTVPYLFLPALAGYDLGLINNPGLSIY 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,339,036
Number of Sequences: 27780
Number of extensions: 508933
Number of successful extensions: 1117
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)